KEGG   Pseudobutyrivibrio xylanivorans: FXF36_07700
Entry
FXF36_07700       CDS       T06217                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
pxv  Pseudobutyrivibrio xylanivorans
Pathway
pxv03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pxv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    FXF36_07700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pxv03021]
    FXF36_07700
   03400 DNA repair and recombination proteins [BR:pxv03400]
    FXF36_07700
Enzymes [BR:pxv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     FXF36_07700
Transcription machinery [BR:pxv03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     FXF36_07700
DNA repair and recombination proteins [BR:pxv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      FXF36_07700
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5
Other DBs
NCBI-ProteinID: QFJ54737
UniProt: A0A5P6VQ88
Position
1:complement(1697205..1698164)
AA seq 319 aa
MLNFENPNIEIVQISEDKKYGRFVVEPLERGYGITLGNSLRRIMLSSLPGAAVSQIKIEG
VLHEFSAIPGVKEDVTEIVMNIKELAIRNNSSSDEPKTAYIEFEGEGVVTAADIQVDSDI
EIINPDLVIAHLNGGNDCKLYMELTITKNRGYISADKNKTPDTPIGKIAVDSIYTPVERV
NMTVEDTRVGQVTDYDKLTLDVYTNGTMGPDEAVSMAAKVLSEHLNLFVNLSDAAQDLSV
IAEKPDDTTGKTLEMSIDELELSVRSYNCLKRAGINTVAELCDKTPDDMMKVRNLGRKSM
EEVEEKLHELGLSLRMIED
NT seq 960 nt   +upstreamnt  +downstreamnt
gtgttaaattttgaaaacccaaatatagaaatcgtacagatttctgaggacaaaaaatac
ggcagatttgttgtagagccactcgaaagaggctacggtataacacttggtaattctctt
cgtagaattatgctttcatctctgccaggagctgcagttagccagattaagattgaaggc
gttcttcatgagttcagcgctattccaggcgttaaggaagacgttacagaaatcgttatg
aatatcaaggaacttgctattagaaataacagcagttcagatgagccaaagacagcatat
atcgagttcgaaggagaaggagtagttacagctgccgatatacaggttgattctgatatc
gaaattattaatcctgatcttgttattgctcaccttaatggtggcaatgattgcaagctt
tacatggagcttacaattacaaagaaccgtggttatatttcagcagacaagaataagact
cctgatactccaatcggcaagattgcagttgactcaatttacacaccagttgaacgtgta
aatatgacagtagaagacactcgtgtaggtcaggttacagattatgacaagcttacactt
gatgtatatacaaatggtactatgggaccagatgaggcagtttctatggctgctaaggtt
ctcagtgagcaccttaacttattcgtaaatctttcagatgctgcacaggatctttcagtt
attgctgaaaagcctgatgatacaacaggaaagactcttgagatgagcattgatgaactt
gagctttcagttcgttcatacaactgcttgaagagagctggtatcaacactgtagctgag
ctttgcgacaagacacctgatgatatgatgaaggttcgtaatcttggtcgtaagtctatg
gaagaagtagaagaaaagcttcacgagcttggtctttcactcagaatgattgaggactaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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