KEGG   Pyrococcus yayanosii: PYCH_06190
Entry
PYCH_06190        CDS       T01543                                 
Name
(GenBank) chromosome segregation protein
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
pya  Pyrococcus yayanosii
Brite
KEGG Orthology (KO) [BR:pya00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pya03400]
    PYCH_06190
DNA repair and recombination proteins [BR:pya03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PYCH_06190
    Archaeal homologous recombinant proteins
     PYCH_06190
SSDB
Motif
Pfam: SMC_N AAA_23 NPV_P10 AAA_13 Rad50_zn_hook AAA_15 AAA_21 DUF1664 BLOC1_2 ABC_tran AAA_29 SbcC_Walker_B GAS Fib_alpha DUF5082 T3SSipB FtsK_SpoIIIE HMBD FlaC_arch DUF5679 ABC_ATPase Phage_GP20 DNA_ligase_ZBD AAA_16 Dynamin_N
Other DBs
NCBI-ProteinID: AEH24307
UniProt: F8AI78
Position
518229..520883
AA seq 884 aa
MRLEKVIIKDFRSHQLTAVDFTPGINLIIGQNGSGKSSILEAILVGLYWPSRPSELKKED
ILRVGGRGTEITVFFEVGGVKYQVHRKIHGSYAHVKYLDNGTWRTIEASGHNAVREWMNR
LISYDVFVNAVYIRQGEIEAILRDDVEREKVVRQVLGIEKLENAYSNLRAVLREIRRRIT
EAEDFLKKTEKVEETIVESERRLIEILSRINELSSKLPELRQELAVVERELKELDEKEKR
INGLKIELERKRGEMRELRAMEGELRKAIEEGKRKIEELKKRLKGLEELEERAKEFKELS
AFLENYRKRKAEIEREISAFEERLRAVEDRIMELEGKIERIAELENKLRELRERLKELEP
FKGKLDEREAIRRELENKRRKLRLSRKEIEKLREEIMRAKSERETLQKRLQELSKLRGEL
ESRMLDREKAIEELKRARGKCPVCGTELTEEHRQELIEKYTLEVSGMEERLREIEEEVGK
IRKKLREVERTLAREVELIKQEELLRQVEELEAKLKSFSPEIEEKAREFERVRDEIGRIE
GEVKGLREEASRLTALKKKRELLKEKLDGRKAWLNELEAELRKKGFGSEDELEKRLRELE
PMYKEYLELRALKGQLEREIKDVAEKEVKLRKVREDVERLRGEIDSIEEELRGLEKTYDP
VRHEEVRKRKERLAVELGKLENELKILEEERERVEKTLEALREQREERKKKMEELKRLKK
AELNAEELRKKIKMYKAAIRERALESVAEIASEIFEELTEGKYSGVVLKADENKLRLFVV
YEGKERPLSFLSGGERIALALAFRLALSMFLAGEMSLLILDEPTPFLDEERRRRLISIME
GYLRKIPQVIVVSHDEELKDAADRVIRVRLEDGVSRVSVEGVVS
NT seq 2655 nt   +upstreamnt  +downstreamnt
atgaggctcgagaaggtaataatcaaggacttccgctctcaccagctgacagcggtagac
ttcactcccggaataaacctcataattggccagaacggcagcgggaagagctccatcctc
gaggcgattttggtaggcctttactggccatcgcgcccgagcgagctgaaaaaggaagac
atcctgagagtagggggcagaggaaccgagataacggtgttcttcgaggtcgggggtgtg
aaataccaggttcacaggaaaatacacggtagctacgcccacgtcaaatatctcgacaac
ggcacctggaggacgattgaggccagcggacacaatgccgtgagggagtggatgaaccgg
ctcatatcctacgacgtcttcgtgaacgccgtctacataaggcagggggagatagaggca
atactaagggacgacgtggagagggaaaaagttgtcaggcaggtgcttggaatagagaag
ctggagaacgcctacagcaacctgagggctgttctgagagagataaggcgtagaattacg
gaagctgaagacttcctcaaaaaaacggaaaaagtcgaggagactatcgtggagagcgag
aggaggctcattgaaatcctcagcaggattaacgagctctcctccaaactcccagagctc
aggcaggagctcgcggtggttgagagggagcttaaggagctcgacgagaaagaaaagaga
atcaacggtctgaagattgaactcgagaggaagaggggcgagatgagggagctcagggca
atggagggggagctcaggaaggccattgaagaaggaaaaaggaagatagaggagctcaaa
aaaaggctcaaaggtctcgaagaactcgaagagagggcaaaggaatttaaagagctttct
gcattcctcgagaattacaggaagaggaaggccgagatcgagagggaaataagtgcattt
gaggagaggctcagggcagttgaggacaggattatggagctcgaggggaagattgaaagg
attgcagagcttgagaataagttgagagagctcagggagaggctcaaggagcttgagccc
tttaaggggaagcttgatgagagagaagccatcagaagggagctcgaaaataaaagaaga
aagttgaggttgagcagaaaggagattgagaagctcagggaagaaattatgagggcaaaa
agtgagagagagacgcttcagaaaaggttgcaagagctgagcaagctgaggggcgagctc
gaaagcaggatgctcgatagggagaaggcaatcgaggagctcaagagggcgaggggtaag
tgccccgtctgcggtaccgagctgacggaggaacacaggcaggagctcatagagaagtac
actctggaagtctcggggatggaggagaggcttagggagattgaagaagaggttgggaag
ataaggaagaagctcagggaagtcgagaggacgctcgcgagggaggttgagctcataaag
caggaggagcttctgaggcaggtcgaggagctcgaggctaagctgaagtccttcagccct
gagatcgaggagaaggcaagggagttcgagagggttagggatgaaatcggcaggattgaa
ggtgaggttaagggcctgagggaagaagcgagcaggctcactgccctgaagaagaagcga
gagttattgaaggagaagctcgatggcagaaaagcctggcttaacgagcttgaagcagaa
ctcaggaagaagggatttgggagcgaggacgagcttgagaagaggttgagggagctcgag
ccgatgtacaaggaataccttgagttgagggccctgaagggacagctcgagagggagatt
aaggacgttgctgagaaggaagtcaagctaagaaaagtccgggaagatgtcgagagactg
aggggtgagatagacagtattgaggaggagcttaggggtcttgaaaaaacctatgatcca
gtgaggcatgaagaggtgagaaagaggaaggagaggctcgctgtggagctcggaaagctc
gagaacgagctgaagatactggaggaggagagggaaagagtcgagaagacccttgaagct
ctaagagagcagagggaggagagaaaaaagaagatggaggagctcaagaggctcaagaag
gccgagcttaacgccgaagagctgagaaagaagataaagatgtacaaggcagcgataagg
gagcgggccctggagagcgttgctgagatagcgagcgagatatttgaagagctgacggag
ggaaaatactccggagtagtcctgaaggcagatgaaaacaagctcaggctcttcgtggtt
tatgaggggaaagaaaggcccctgagcttcctcagcggcggtgaaaggatagccctcgcc
ttagccttccgcctcgccctctccatgttcctggctggcgagatgagccttctcatcctt
gacgagccaacgcccttcctagatgaggagaggcgcaggaggcttataagcataatggag
ggctacctcagaaagataccccaggtcatagtggtgtcccacgacgaggaactgaaagat
gcggcggatagggtcataagggttcggctcgaggacggtgtttccagggtgagcgtcgag
ggggtggtctcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (25)   
   Pfam (25)   
All databases (32)   

Download RDF
DBGET integrated database retrieval system