KEGG   Paracoccus yeei: A6J80_07250
Entry
A6J80_07250       CDS       T04781                                 
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
pye  Paracoccus yeei
Brite
KEGG Orthology (KO) [BR:pye00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pye03009]
    A6J80_07250
Enzymes [BR:pye01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     A6J80_07250
Ribosome biogenesis [BR:pye03009]
 Prokaryotic type
  ribosomal protein modification factors
   A6J80_07250
SSDB
Motif
Pfam: Radical_SAM TRAM_2 UPF0004 CLP1_P
Other DBs
NCBI-ProteinID: ARC38463
UniProt: A0A1V0GX69
Position
971687..973078
AA seq 463 aa
MSQNPPLLRPDLAPSPNFDSALGDGGRRDGQPTIGMVSLGCPKALVDSERILTRLRAEGY
AISPDYKGAGAVIVNTCGFLDSAKAESLQAIGEALAENGKVIVTGCLGAEPEYITGAHPS
VLAVTGPQQYEQVLDAVHHAVPPSPDPFVDLLPASGVKLTPRHYSYLKISEGCNHACKFC
IIPDMRGKLVSRPAHAVMREAEKLVEAGVRELLVISQDTSAYGLDRKFATERGHRAHITD
LSRDLGSLGAWVRLHYVYPYPHVRDLIPLMAEGLVLPYLDIPFQHAHPDVLKRMARPAAA
ARTLDEIAAWRAACPEITLRSTFIVGYPGETEAEFQTLLDWLDEAQLDRVGCFQYENVAG
ARANLLPDHVPAEVKQERWDRFMEKAQAISEAKLAAKVGRRIEVIVDSVDEDGATCRTKA
DAPEIDGNLFIDDGFEALTPGDIVSVTVDEAGEYDLWGRLDAG
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgagccagaacccgcccctgctgcgccccgatctagcccccagcccgaatttcgactcc
gccttaggtgacggagggcgaagggacgggcaaccgaccatcggcatggtcagccttggc
tgtcccaaggcgctggtcgacagcgaacgcatcctgacgcgcctgcgcgccgaaggctat
gccatcagccccgactacaagggcgcgggcgcggtgatcgtgaacacctgcggcttcctt
gattcggccaaggccgaaagcctgcaggccatcggcgaggcgctggcggaaaacggcaag
gtcatcgtcaccggctgcctgggcgcggaacccgaatacatcaccggcgcgcatccgtcc
gtgctggccgtgaccggcccgcagcaatacgaacaggtgctggacgcggtgcaccatgcc
gtgccccccagccccgacccgttcgtggacctgctgccggctagtggcgtcaagctgacg
ccgcgccattacagctatctgaagatttccgaaggctgcaaccacgcctgcaagttctgc
atcattcccgacatgcgcgggaaactggtcagccgcccggcgcacgcggtgatgcgcgag
gcggaaaagctggtcgaggccggggtgcgcgaactcctcgtgatctcgcaggacacctcg
gcctatggccttgaccgcaagttcgcgaccgagcgcggccaccgcgcccatatcaccgac
ctgtcccgcgacctggggtcgcttggcgcctgggtgcggctgcattacgtctatccctat
ccgcatgtgcgcgacctgatcccgctgatggccgaggggctggtgctgccctatctggac
atccccttccagcacgcccacccggacgtgctgaagcgcatggcccgcccggcagcggcg
gccaggacgctggacgagatcgcggcctggcgcgccgcctgcccggaaatcaccctgcgc
tcgaccttcatcgtcggctatccgggcgagaccgaggccgagttccagaccctgctcgac
tggctcgacgaggcgcagctggaccgcgtcggctgcttccaatacgaaaacgtcgccgga
gcgcgggcgaacctgctgcccgaccatgtgcccgccgaagtcaagcaggagcgctgggac
cgcttcatggaaaaggcgcaggcgatttccgaggcgaagctcgccgccaaggtcggacgc
cgcatcgaggtgatcgtcgattcggtcgatgaggacggcgcgacctgccgcaccaaggcc
gatgcgccggaaatcgacggcaacctgttcatcgacgacgggttcgaggcgctgacaccg
ggcgacatcgtgagcgtgacggtggacgaggccggagaatacgacctctggggtcggctc
gacgcgggctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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