KEGG   Plasmodium yoelii: PY17X_0814300
Entry
PY17X_0814300     CDS       T01035                                 
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3, putative
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
pyo  Plasmodium yoelii
Pathway
pyo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pyo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PY17X_0814300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pyo03019]
    PY17X_0814300
   03041 Spliceosome [BR:pyo03041]
    PY17X_0814300
   03032 DNA replication proteins [BR:pyo03032]
    PY17X_0814300
Messenger RNA biogenesis [BR:pyo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     PY17X_0814300
Spliceosome [BR:pyo03041]
 Complex A
  U1 snRNP components
   Sm proteins
    PY17X_0814300
  U2 snRNP components
    PY17X_0814300
 Complex B
  U1 snRNP components
    PY17X_0814300
  U4/U6.U5 tri-snRNP components
    PY17X_0814300
 Complex C
  U2 snRNP components
    PY17X_0814300
DNA replication proteins [BR:pyo03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     PY17X_0814300
SSDB
Motif
Pfam: LSM SM-ATX LSM14
Other DBs
NCBI-GeneID: 3431661
NCBI-ProteinID: XP_022811935
Position
8:join(620752..620847,620982..621062,621313..621486)
AA seq 116 aa
MSVGTPIKLIHEGIGHTISVETKSGILYRGILLFAEDNMNCLLSNVTVVKQDGKQILLEQ
VYIRGGSVSFMIFPDMLRYAPIFKVNKSKAKTNFATIRRAMEAHARIASKSKDLKA
NT seq 351 nt   +upstreamnt  +downstreamnt
atgtcagtaggaacccccattaaattaatacatgaaggaataggccataccatatcagtt
gaaacaaaatccggaatcctttatagaggaatattgttattcgcagaagataatatgaat
tgcttgctatcaaatgttacagttgttaagcaagacggaaagcaaattttgttagagcaa
gtttatataagaggaggcagtgtttcatttatgatttttccagatatgcttagatatgcc
ccaatatttaaagtaaataaatcaaaggctaagacaaattttgcaactattagaagagca
atggaagcacatgctcgaatagcttcaaaaagtaaagacttgaaggcatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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