KEGG   Plasmodium yoelii: PY17X_1113000
Entry
PY17X_1113000     CDS       T01035                                 
Name
(RefSeq) CDK-activating kinase assembly factor MAT1, putative
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
pyo  Plasmodium yoelii
Pathway
pyo03022  Basal transcription factors
pyo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pyo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PY17X_1113000
  09124 Replication and repair
   03420 Nucleotide excision repair
    PY17X_1113000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pyo03021]
    PY17X_1113000
   03400 DNA repair and recombination proteins [BR:pyo03400]
    PY17X_1113000
Transcription machinery [BR:pyo03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     PY17X_1113000
DNA repair and recombination proteins [BR:pyo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     PY17X_1113000
SSDB
Motif
Pfam: MAT1 zf-C3HC4 zf-UDP zf-RING_2 zf-RING_5 zf-C3HC4_2 zf-RING_4 zf-C3HC4_3 zf-C3HC4_5 Fer2_3 zf-RING_UBOX LptF_LptG
Other DBs
NCBI-GeneID: 34859968
NCBI-ProteinID: XP_022812372
Position
11:complement(640492..641274)
AA seq 260 aa
MDEYKCSLCLDDIYVNTEKKLFLFDICKHKICGECLENHLNKHNKQHCPRCKIAITKKNV
VPFDIEEKIYSNQKNIRSKLTEIFNKKRHNFQNTPLYNNYLEKIEDIIFMLTNECDEKKR
KIIEAYIKRYEKENIKLIEENNSLIYENEKKKIHEIVKEEGNLYEIIKQRPIVNKLNNET
YVHSLVKENPKLFNEVKVTNISESQPQPLNPAIRNDTDIPVRKFVSEEEIKKSDYAGGYD
ISIVFKRCDQEFNSTIYLNI
NT seq 783 nt   +upstreamnt  +downstreamnt
atggatgaatataaatgttccttatgtttggatgatatatatgtaaatactgaaaaaaaa
ctatttttatttgatatatgcaaacataaaatatgtggagaatgtttggaaaatcattta
aataaacacaataagcaacattgcccacgttgtaaaatcgctataacaaaaaaaaacgta
gttccatttgatatagaagaaaaaatatattccaatcaaaaaaatataagaagtaaatta
actgaaatatttaataaaaaaagacataattttcaaaatacacccttatataataattat
ttagaaaaaattgaagatataatttttatgctaacaaatgaatgtgatgaaaaaaaacgt
aaaattattgaagcatatattaaaagatatgaaaaagaaaatataaaattaatagaagaa
aataattctcttatatatgaaaatgaaaaaaaaaaaattcatgaaattgttaaggaagaa
gggaacctatatgagataattaaacaaagacctattgtaaataaattaaataacgaaaca
tatgttcattcgctagttaaagaaaaccctaaattatttaatgaagttaaagtaactaac
atttctgaatcacagccacaaccattaaaccctgctatcaggaatgatacagatatacct
gtacgtaaatttgtttcagaagaggagattaaaaaatctgactatgcaggaggatatgat
atttctattgtttttaagagatgtgatcaggaatttaattctaccatatatctcaatata
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (24)   

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