KEGG   Candidatus Phytoplasma ziziphi: CWO85_00260
Entry
CWO85_00260       CDS       T05675                                 
Name
(GenBank) hypothetical protein
  KO
K03530  DNA-binding protein HU-beta
Organism
pzi  Candidatus Phytoplasma ziziphi
Brite
KEGG Orthology (KO) [BR:pzi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pzi03032]
    CWO85_00260
   03036 Chromosome and associated proteins [BR:pzi03036]
    CWO85_00260
   03400 DNA repair and recombination proteins [BR:pzi03400]
    CWO85_00260
DNA replication proteins [BR:pzi03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    CWO85_00260
Chromosome and associated proteins [BR:pzi03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    CWO85_00260
DNA repair and recombination proteins [BR:pzi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      CWO85_00260
SSDB
Motif
Pfam: Bac_DNA_binding ENT RodZ_C
Other DBs
NCBI-ProteinID: AYJ00979
UniProt: A0A660HM70
Position
complement(36232..36561)
AA seq 109 aa
MKIRGIKMNKLQLISKMSKKLNVKAEQVGEFLSCLSDVVVESLKEERQESPDSKVIKVVI
GNLGAVHLRHRKEKVCKVPKSDKVVTLPARFVPVFKISKTFKDLTSEEI
NT seq 330 nt   +upstreamnt  +downstreamnt
atgaaaattagaggaattaaaatgaataagttacaattaattagcaagatgtctaaaaag
ttaaatgttaaagcagaacaagtaggagaatttttgtcttgtttaagtgatgttgtggta
gaaagcttaaaagaagagagacaagaaagtcctgattcaaaagtaattaaagtagttatt
ggtaatttaggagcagtacatttaagacatagaaaagaaaaagtatgtaaagttccaaaa
agcgataaagttgtaactcttccagctagatttgttccagtatttaaaataagcaaaaca
tttaaagatttaacttcggaagaaatttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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