KEGG   Quercus suber (cork oak): 111992287
Entry
111992287         CDS       T05868                                 
Name
(RefSeq) DNA helicase INO80
  KO
K11665  chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    111992287
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:qsu03036]
    111992287
Chromosome and associated proteins [BR:qsu03036]
 Eukaryotic type
  Chromatin remodeling factors
   INO80 complex
    111992287
   INO80 complex (yeast)
    111992287
SSDB
Motif
Pfam: SNF2-rel_dom DBINO Helicase_C ResIII HDA2-3 DEAD
Other DBs
NCBI-GeneID: 111992287
NCBI-ProteinID: XP_023879926
Position
Unknown
AA seq 1539 aa
MEHRRQSKDSHSYSNLFNLESLVNFQLPQQDDDFDYYGNSSQDESRGSQGGVNVKHGNGV
MRERELGLLKKRRQGENSEDEEDSYYGTRITEERYRSMLGEHIQKYKRRFKDSSASPAST
RMGISVPRSNMGLKARKLGNEHRGALHEVESTSDWLNDINPQKQGNYHEADFSPLNGTER
TTYEPAFVDIGDGITYKIPPTYDKVAPSLSLPSFPDIQVEEFFLKGTLDLGSLASMMTNN
NKFGPRSQAGMGEPQPQYESLHARLKALSASKSPQKFNLKVSDMNSSIPEGAAGNIKRSI
LSEGGVLQVYYVKVLEKGDSYEIIERALPKKPKVKKDPAVIEREEMEKIGKVWANIVKKD
LPKHHRIFTAFHRKQLIDAKRFVESCQKEVKTKMGRSHKLMKGAAIRTRKLARDMLLYWK
RVDKEMAEVRKREEKEAAEALRREQELREAKRQQQRLNFLIQQTELYSHFMQNKSNAQPS
EVLPVGDENLNDEEVLPSSSDAVPDEEEDPEEAELKKEALRAAQDAVSKQKKLTSAFDNE
CLRLRQASDSETYLPEVAGASNIDLHNPTTMPVTSTVQTPQMFKGSLKEYQLKGLQWLVN
CYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWNDEINRFCP
DLKTLPYWGGLQDRTVLRKKIKPKDLYRREAGFHILITSYQLLVSDEKYFRRVKWQYMVL
DEAQAIKSSNSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNE
WFSKGIENHAEHGGTLNEHQLNRLHSILKPFMLRRVKTDVISELTRKTEVTVHCKLSSRQ
QAFYQAIKNKISLAELFEGNRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGRTYLHF
GEIPNSLLPPPFGELEDVHYAGGHNPITYKIPKLVHEEITHSSETLCTAVGRGVCRESFH
KLFNIYSPENVYRSIFLREDNSDGLSFESRTFGFTRLMDLSPSEVTFLATSSFMERLLFS
VMRWDQHLLDGLIESLMETMDDDPECSYLEKGKMRAVARMLLMPSRSNTNLLRSKYATGP
GDAPFEALVVPHEDRFLSNSRPLHSAYTFIPRVRAPPVGAHCSDRNFAYKMSEELHDPWI
KRMFIGFARTSDCNGPRKPVGPPHHLIQEIDSELPVSQPALQLTYKILGSSPPTRSFDPA
KLLTDSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIT
DRRDMVRDFQHRNDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLG
QTKDVTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDLLAPEDVVSLLLDDAQL
EQKLREIPLQVKDRQKKKQSTKGIRVDAEGDASLEDLTNAGSQGTGPEPSPDPEKTKSSN
KKRKAASDKQAPSKQRNPQNVTSPMDYELDDPLQNSDPQAQKPKRPKRPTKSVNENLQPA
FTGTPIVVSEQTHYLPVNELGSGGFRAGQDISQHTNSFT
NT seq 4620 nt   +upstreamnt  +downstreamnt
atggaacacaggagacaatccaaggactcgcattcctactcgaatctcttcaatcttgag
tctttggtgaactttcaacttccacaacaggatgatgattttgattattatgggaatagt
agtcaggatgagagcagaggtagccaaggtggagtgaatgtgaaacacggtaacggggtt
atgcgtgaaagagaattgggtttgttgaagaaaaggaggcagggtgaaaatagtgaggac
gaggaggatagttattacgggacacgcattacggaggagagatatcgatcaatgcttgga
gaacacattcagaagtacaagaggagattcaaggattcctcagcaagtcctgcatcaacc
aggatgggaatctctgttccaaggagtaatatgggtttaaaagctaggaaactagggaac
gagcatcgaggagcattacatgaagttgaatcgacgtccgactggctcaatgatattaat
cctcaaaaacaagggaactatcatgaagcagatttttcaccgctaaatggcactgaaaga
acaacatatgaacctgcttttgtggatattggagatggtatcacgtataagattcctcca
acttatgataaggtggcaccatcactgagcttgccgagctttccagatattcaggtggag
gaatttttcttaaagggtacattggatctggggtccttggcatcaatgatgacaaataat
aataagtttgggcctagaagccaggcaggaatgggggagcctcagccccagtatgaatca
cttcatgcaagattgaaggccttgtcagcttctaaatcaccccaaaagttcaatctcaaa
gtatctgatatgaattcctccattccagagggggcagctggaaacataaagcgatctatt
ttgtctgagggtggcgttttgcaggtttactatgtgaaggttttggagaaaggagactca
tatgagatcattgaacgggctctgcccaagaagccaaaggtaaagaaagaccctgctgtg
attgaaagggaggaaatggagaagattgggaaagtgtgggcaaacatcgtaaagaaagac
ctaccaaagcatcacagaatttttacagcttttcaccgaaagcaactaattgatgccaag
aggttcgtagagagctgtcaaaaagaggtgaaaacgaagatgggaaggtcacataaactg
atgaagggtgctgcgattcgcactaggaaattagctcgagacatgctgctgtattggaag
cgagtagataaagagatggcagaagtaaggaaaagagaggagaaagaagctgctgaagct
ctgaggcgtgaacaagagctacgagaagcaaagagacagcagcaaaggctcaattttctt
atacaacaaacggaactctacagtcattttatgcaaaacaagtcaaatgcacagccctct
gaagttttgcctgtgggagatgaaaatctaaatgacgaagaagtacttccgagctcttca
gatgctgtacctgatgaggaagaagatcctgaggaggctgaattgaagaaggaagccttg
agagctgctcaagatgcagtttctaagcagaaaaagttaacaagtgcatttgataatgaa
tgtttgagactgcgacaggcttctgactctgagacttatttacctgaggttgcaggagct
agtaacatagatttacataacccaactacaatgcctgtaacatcaacagttcagactccg
cagatgtttaaaggttcccttaaagaatatcagctaaaaggccttcagtggctagttaat
tgttatgagcagggtttaaatggcatacttgctgatgagatgggccttgggaagaccatc
caggccatggcatttttggctcatttggcagaggagaaaaatatatggggcccttttttg
gttgttgccccagcttctgtattgaataactggaatgatgaaattaatcgtttctgccct
gacttgaaaactcttccatattggggtgggcttcaagatcgaaccgtacttaggaaaaag
atcaaacccaaggacctgtaccgcagggaagctggatttcacattctcattaccagctac
cagctgctagtgtctgatgagaagtactttcggcgtgtgaaatggcaatacatggtgtta
gatgaagcccaggcaatcaaaagttcgaacagtataagatggaagacactgcttagcttc
aattgtcggaaccgactgctgctgactggtacacctatccagaataatatggcagagttg
tgggcccttttgcattttattatgccaaccttatttgacagccatgaacaatttaatgag
tggttttcaaaaggaattgagaaccatgcagagcacgggggtactttgaacgagcaccag
cttaacagattgcattcaattctaaagccgtttatgctgcgaagagttaaaacagatgta
atttctgagctgaccaggaaaactgaggttacagtgcattgcaaattgagttctcgccag
caagctttttatcaggctattaagaacaagatatctcttgccgagttgtttgagggcaat
cgtgggcatcttaatgagaagaaaatactaaatttaatgaatattgtcattcagctgaga
aaggtgtgtaatcatccagagttgtttgaaaggaatgagggaagaacatacctccacttt
ggggagatcccaaattctcttctgccccctccctttggggagttggaggatgtgcactat
gcaggaggtcacaatcctataacatacaagataccgaaactagttcatgaagaaattacc
catagttctgaaactctttgcacagcagttgggcgtggtgtctgcagagaatcttttcac
aaactcttcaacatatactcacccgaaaatgtctatcgatctatattcctacgagaggat
aattcagatggattatcttttgaaagtagaacttttggttttacacgtttgatggatctg
tccccgtcagaggttacatttttggctactagctcttttatggagcgactactgttttct
gtaatgagatgggaccagcacttgttggatggactcatagaatcacttatggaaaccatg
gatgatgaccccgaatgcagttaccttgagaaagggaaaatgagagcagttgcgcggatg
ttactgatgccatcaagatctaatacaaacttactacgaagtaaatatgcaacggggcct
ggagatgctccatttgaggctttagttgtccctcatgaggacaggtttctatccaatagt
aggcctcttcattcagcatacacatttatcccgagagttagagctccaccagttggtgct
cactgctccgatagaaactttgcctacaaaatgtctgaagaactacatgacccctggata
aagaggatgtttattgggtttgcacgcacatctgactgtaatggacccagaaagccagtt
ggtcctcctcatcatttgattcaagagattgattctgaactaccagtctcacaacctgct
cttcagttgacatacaagattttgggatcttctccaccaacgagaagctttgacccggca
aagttgctcactgactctgggaagcttcaaacacttgatatattgttgaaacgtttgcgg
gcagaaaatcaccgtgttctcttgtttgcccaaatgacgaagatgctgaatattcttgag
gactacatgaactataggaaatatagatatcttagactcgatggatcctccaccataact
gatcgtcgagatatggtcagagatttccagcatcggaatgatatttttgtattcttgttg
agcacaagagctggtggactgggcattaacttgacagcggctgacactgtcatattttat
gaaagtgattggaatccaactttggatttacaggcaatggatagagctcatcggttgggt
caaacaaaagatgttactgtttaccgacttatttgtaaagagacagttgaagagaagatt
cttcaaagagcaagtcagaagaatactgtgcagcaacttgttatgacaggtggtcatgtt
cagggtgatctattggcccctgaggatgttgtatccttacttctggatgatgcccaactc
gagcagaaattgagagaaattccattgcaggttaaggatagacaaaagaaaaaacaatca
acaaagggtattcgggtagatgcagaaggtgatgcatctttggaagacctaacaaatgct
ggatctcagggtacaggacctgagccctctccagatccagagaaaacaaaatccagtaac
aaaaagagaaaggctgcttctgacaaacaagctccatcaaagcaaaggaatcctcaaaat
gtgacttcaccaatggactacgagttagatgacccccttcaaaattctgatccacaagca
cagaagcccaaaaggccaaagagaccaacgaagagtgtaaatgaaaatcttcaaccagca
tttaccggcacacccattgtagtttcagaacagacccattatctacctgtgaatgagtta
ggatctggtggtttcagagcagggcaagatatctcacagcataccaactcgttcacttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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