KEGG   Quercus suber (cork oak): 111994147
Entry
111994147         CDS       T05868                                 
Name
(RefSeq) transcription initiation factor IIB-like
  KO
K03124  transcription initiation factor TFIIB
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    111994147
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:qsu03021]
    111994147
Transcription machinery [BR:qsu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     111994147
 Prokaryotic type
  Archaeal type
    TFB
     111994147
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon Cyclin_N Ribosomal_S27e zf-ribbon_3 RB_B LysW-like_globular
Other DBs
NCBI-GeneID: 111994147
NCBI-ProteinID: XP_023881775
Position
Unknown
AA seq 323 aa
MASSASSLSSEWLCPECKRATEVVLDHSAGDTVCSECGLVLEAHSIDETSEWRTFTNESG
DNDPVRVGGPSNLLLSDGGLSTVISSRPNNANGGSDFLGSGLGRWQSRGSNPDRSLLQAF
KAIASMSDRLGLVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTVK
EICSVANGATKKEVGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNQAVKA
AQEAVQKSEELDIRRSPISVAAAVIYMITQLSDDKKLLKDISLSTGVAEGTIRNSYKDLY
PYAVRLIPSWCAKEEDLGNLCSP
NT seq 972 nt   +upstreamnt  +downstreamnt
atggcatcgtcagcatcatcattatcgtcagagtggttatgtccagagtgcaagcgagca
acggaggtggtgctagaccactcagcaggcgacaccgtgtgctccgagtgtggcctagtt
ctcgaggctcactccatcgacgagacctcagagtggcgcaccttcaccaacgagtccggt
gacaacgaccccgttcgcgtcggagggccctccaaccttctgctttccgacggcggcctc
tccaccgtgatatcttcaagacccaataatgcgaacggtgggagtgacttcttgggttcg
ggtttgggccggtggcagagccgtgggtctaacccggatcgctcgcttcttcaagctttt
aaagccattgcctccatgtctgataggttgggccttgttgcaacaataaaggatcgagcc
aatgaaatatataagaaagtagaagatcaaaaacctctccgtggacgaaatcaggatgca
attttggctgcatgcctctacattgcttgtcgtcaagaagacaagccccgcactgtgaaa
gaaatttgttctgttgctaatggagccacaaagaaggaagttggtcgtgcaaaagagttt
attgtaaaacaactggaagtagagatgggtcagtctatggaaatgggaaccatacatgct
ggggattttttgagacgtttttgttcccaccttggcatgactaatcaagcagtaaaggct
gctcaagaagctgttcagaaatctgaagagcttgatattaggaggagcccaatatcagta
gcagcagctgtaatttatatgataactcagctatcagatgacaagaagcttctcaaagac
atatctctttccactggagtggctgaagggaccatcaggaattcctacaaggatctttat
ccctatgctgtaaggctaataccaagttggtgtgcgaaggaggaagatcttgggaacctc
tgcagcccataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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