KEGG   Quercus suber (cork oak): 112001122
Entry
112001122         CDS       T05868                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 36
  KO
K12190  ESCRT-II complex subunit VPS36
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112001122
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:qsu04131]
    112001122
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:qsu04147]
    112001122
Membrane trafficking [BR:qsu04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    112001122
Exosome [BR:qsu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   112001122
  Exosomal proteins of colorectal cancer cells
   112001122
SSDB
Motif
Pfam: EAP30 Vps36_ESCRT-II PH_TFIIH
Other DBs
NCBI-GeneID: 112001122
NCBI-ProteinID: XP_023889057
Position
Unknown
AA seq 445 aa
MATNYLPKADLTSSGRPVFLPNEIECSILSSVDLECDDIPNFPLLKSGLLILTTHRLLWL
PDNSSSTSSAAVALPLSFLTHIFSTKKSVKTLFHSPRVRFQASLDPSKSVVMTVVMRGKG
DTDAFLAKFWENWRARAWENDVQTQAQGGAVGSSSVSGSGPGSGSGGFYTREGAVRMVGV
SGILRKEQEMWESTDKSLQEAFQDLNALMSKAKEMVILAEKMRQKLLSGSNSKSSATNDD
EVGSKEEMQDWLLSVGIVSPVTKESAGALYHQQLSRQLADYVRIPLERAGGMINLIDVYC
LFNRARGTELISPDDLLRACSLWEKFDVPVMLRKFDSGVMVIQNKSHSDEEVFARIKALV
TNPDTLRTGISASDAAMTLGIAPGMAKEHLLTAESKGLLCRDISPDGFRFYINLFPEINT
DDVYLVKDYGIYNTWVKVASASRLE
NT seq 1338 nt   +upstreamnt  +downstreamnt
atggcaacaaactatctccctaaagcagacctcacaagcagcggtcgacctgtctttctc
ccaaacgaaatcgagtgttccatcctctcttccgtcgacctcgaatgcgacgacatcccc
aacttccctctcctcaaatccggtctcctcattctcaccacccaccgcctcctctggctc
ccggacaactcctcctccacctcctccgccgccgtggctctccctctctccttcttaacc
cacatcttctccaccaagaagtccgtcaaaaccctcttccactccccgcgcgtccgcttc
caagcctccctcgacccctccaaatcggtggtgatgaccgtcgtgatgagagggaagggc
gatacggatgcgtttctcgccaagttctgggagaactggagggccagggcttgggagaac
gatgttcagacccaggctcagggtggtgctgttgggtcgagttcggtttccgggtcgggt
ccgggttctgggtctggtgggttttacacgagggaaggggcggtgaggatggtgggggtg
tctgggatactgaggaaggagcaggagatgtgggaaagtactgacaagagcttgcaggaa
gcttttcaggacttgaatgctcttatgagtaaggctaaagagatggttatactagcagag
aaaatgagacaaaaacttttgtctggctcaaactctaaatctagtgcaacaaatgatgat
gaagtgggttctaaagaagagatgcaagattggttgttgagtgttggtattgtatcccct
gttacgaaagagtctgctggagcgctgtatcatcaacaattgtcccgccagttggcagat
tatgtcagaattccgcttgagagagctggaggaatgatcaatcttatagatgtctattgt
ctcttcaaccgtgctcgaggcacagaattgatctcaccggatgatttgttgcgagcatgt
tctctctgggagaagtttgatgttccagtgatgcttcggaagtttgatagtggagtcatg
gtcatccagaataagtcccacagtgatgaggaggtttttgcaagaatcaaggcccttgta
acaaatcctgataccctacgaactgggataagtgcaagtgatgctgcaatgacattagga
attgctccaggcatggcgaaggagcatcttctaactgctgagagcaaaggtttactatgc
agagatataagccccgatggcttccgattttacatcaacctctttcctgaaattaataca
gatgatgtttacttggtgaaagattatgggatctataatacatgggttaaggtggcctct
gcttctaggttggagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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