KEGG   Quercus suber (cork oak): 112022916
Entry
112022916         CDS       T05868                                 
Name
(RefSeq) probable pectate lyase 12
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
qsu  Quercus suber (cork oak)
Pathway
qsu00040  Pentose and glucuronate interconversions
qsu01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    112022916
Enzymes [BR:qsu01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     112022916
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix NosD
Other DBs
NCBI-GeneID: 112022916
NCBI-ProteinID: XP_023911308
Position
Unknown
AA seq 478 aa
MLPRTCIVLISLLCSFSPLGRAMLNLTLPGQHPNPEAVVQEVHRKVNASIARREMLQVSQ
KDQATCQTGNPIDDCWKCDPNWANNRQRLADCAIGFGQYAVGGKNGEFYLVTDSSDDDAV
NPKPGTLRYAVIQTEPLWIVFPSNMLIKLSQELIFNSYKTLDGRGANVHIVGGGCITLQF
ISNVIIHNIHIHHCHPSGDTNVRSSPTHYGYRTKSDGDGISIFGSKDIWIDHCSLSHCKD
GLIDAVMGSTGLTISNNYFSHHNEVMLLGHSDDYLPDTGMQVTIAFNHFGEKLVQRMPRC
RRGYIHVVNNDYTQWEMYAIGGSGNPTINSQGNRYTAPLDPNAKEITKRVDTEEGKWKGW
NWRTDGDIMVNGAIFVASGQGVEVKYEKAYSVEPKSAVLIDQLTMHAGALGVGGRDNNLG
MWSTGPNGGGTDLDSGPDYTDDWSGSSGPLLPSTSTFLSLLIALSCLLFYKIHPTFML
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgctcccaaggacctgcattgtcctaatttctcttctctgctcattttctccacttggt
agagcaatgctcaacctcactcttcctggtcaacatcccaaccccgaagctgttgtccaa
gaagttcacaggaaggtaaatgcttctatagcaagaagggaaatgctacaggtctctcag
aaagaccaggccacatgccaaacaggaaaccccatagatgactgttggaaatgtgacccg
aattgggccaacaacagacagagactagcagattgtgcaattgggtttggccaatatgct
gtcggtggcaagaatggtgaattctaccttgtcactgactcctcagacgatgatgctgtg
aatcctaagccaggcacgctaagatatgcagtgattcagactgagcctctatggattgtg
tttcctagcaacatgctcattaagctgtctcaggagctcatctttaatagctacaagact
cttgatgggcgaggggctaatgtgcacattgtgggtggtgggtgcattactctccagttt
ataagcaatgtcattatacacaacattcatatccaccattgtcatccgtcaggcgatact
aatgtgcggtcgagcccaacccactacggctaccgcacaaaatcagacggcgatgggatc
tccatctttgggtcgaaagacatatggatagatcactgttccctctcacactgcaaagat
gggctgattgatgcagttatggggtccacagggctcacaatatcaaacaattatttctcg
catcacaatgaggtgatgttattgggccacagcgatgactacttgccagacacaggaatg
caagtgaccatagcattcaatcactttggtgaaaaattggtgcagagaatgccaaggtgt
agacgtggctacatccatgtggttaacaatgattatactcagtgggagatgtatgctatt
ggtggcagtggtaaccctaccattaatagccaaggcaatcgctacaccgctcctcttgat
cccaatgccaaggagataacgaagcgagtggacacggaggaaggaaaatggaagggatgg
aattggaggacagacggcgatataatggtgaacggagcaatatttgtggcctcaggtcag
ggtgtagaggttaagtacgagaaggcttatagcgtggagcccaaatcagccgtgcttatt
gaccagctcactatgcatgccggcgcccttggagttggtggcagggacaacaacttggga
atgtggagtacaggacccaatggtggtggaacagatttagactcaggcccagactacacg
gatgactggtcgggaagcagtgggccactgttaccttctacttcgactttcttatccctt
ttgattgcattgtcatgtttgttattttataaaatacatcccacttttatgttataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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