KEGG   Quercus suber (cork oak): 112024340
Entry
112024340         CDS       T05868                                 
Name
(RefSeq) ATP-dependent zinc metalloprotease FTSH 6, chloroplastic
  KO
K03798  cell division protease FtsH [EC:3.4.24.-]
Organism
qsu  Quercus suber (cork oak)
Brite
KEGG Orthology (KO) [BR:qsu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:qsu01002]
    112024340
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:qsu03110]
    112024340
Peptidases and inhibitors [BR:qsu01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   112024340
Chaperones and folding catalysts [BR:qsu03110]
 Other chaperones and cochaperones
  AAA proteases
   112024340
SSDB
Motif
Pfam: Peptidase_M41 AAA AAA_lid_3 FtsH_ext TIP49 AAA_5 AAA_17 AAA_16 RuvB_N AAA_22 nSTAND3 AAA_33 IstB_IS21 AAA_28 Mg_chelatase AAA_14 DUF5906 LonB_AAA-LID AAA_18 AAA_7 Parvo_NS1 Sigma54_activat RNA_helicase ABC_tran Zeta_toxin AAA_24
Other DBs
NCBI-GeneID: 112024340
NCBI-ProteinID: XP_023912746
Position
Unknown
AA seq 677 aa
MSPALSLHLSHPPISKSQDLSKDNTNLTKSTYKKNPCQKTPLDIKISRGKLIKSTALGLT
GGGLSVAQPARAEQESPVEATSSRMSYSRFLQYLDEDAVRKVDLFENGTVAIAEIFNPIL
NKIQRVKIQLPGLPQELLRKMKEKNVDFAAHPMEVDWWPAILDLLGNLAFPLILLGSLLL
RTSSTNTPGGPNLPFGLGRSKAKFQMEPNTGVTFDDVAGVDEAKQDFEEIVEFLKTPEKF
TAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLF
NKAKANSPCLVFIDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFNGNTGVIVIAAT
NRPEILDSALLRPGRFDRQVTVGLPDVRGREEILKVHSNNKKLDKDISLSVIAMRTPGFS
GADLANLMNEAAILAGRRGKEKITMKEVDDSIDRIVAGMEGTKMTDGKNKILVAYHEIGH
AVCATLTPGHDPVQKVTLIPRGQARGLTWFIPGEDPALISKQQLFARIIGGLGGRAAEEV
IFGESEITTGATGDLQQITQIARQMVTMFGMSEIGPWALTDPVLQSSDVVLRMLARNSMS
EKLAEDIDSSVRDIIESAYEIAKNHIRNSREAIDKLVDVLLEKETLTGDEFRAILSEFTD
ISSIKLDRTPIRDLIEA
NT seq 2034 nt   +upstreamnt  +downstreamnt
atgtcacctgctttatcattgcatctttcccaccctccaatctccaagtctcaggacctc
tcaaaggataacaccaacctcacaaaaagtacttataaaaaaaacccatgtcagaaaaca
cctttagacatcaaaatcagtaggggaaagctaataaagtcaactgctttgggccttact
ggaggaggactctctgttgctcaacctgcaagggctgaacaagagagtccagttgaagcc
acttcaagtagaatgtcatactcaagattcttgcagtacttagatgaagacgctgtaaga
aaggtagacctgtttgagaatgggactgttgccattgctgagatattcaatccaatacta
aacaaaatccagagggtcaaaattcagctacctggattgccacaagaattactgaggaaa
atgaaagagaagaatgtagacttcgctgctcatccaatggaagtggactggtggcctgca
atactagatttgttggggaatctggcttttccattgatattgcttggcagtttgctgctt
agaacatcatctacaaacactccaggaggccccaacttgccatttggacttggaaggagc
aaagctaaatttcaaatggaacccaacactggagttacgtttgatgatgttgctggtgtt
gatgaagcaaagcaagattttgaagagattgttgagttcttgaaaaccccagaaaagttt
actgcagttggagctaaaattcctaaaggagttcttcttgttggtccacctgggactgga
aagacattgttggccaaggcaattgctggagaagcaggggttcctttcttttctctatct
gggtcagagttcattgagatgtttgttggtgtaggggcttcaagagtgagggacttattc
aacaaagcaaaggctaattccccatgcttggtttttattgatgagatagatgctgttggg
aggcagagaggaacaggtattggtggaggaaatgatgagagggaacaaacactcaaccag
ctgcttactgaaatggatggttttaatggaaacactggagtgattgttattgctgctacc
aatcgaccagaaattcttgattctgctttgcttaggccagggaggtttgacagacaggtc
actgttggattacctgatgtgcgagggagggaagaaatattaaaggtgcatagcaacaac
aagaaacttgataaggatatatctcttagtgttatcgccatgcgaaccccaggtttcagt
ggtgcagacctggcaaatcttatgaatgaggctgccattcttgctggtaggagaggtaaa
gagaagatcacaatgaaagaggtagatgattcaattgatcggattgtggcaggaatggag
ggaaccaaaatgacagatgggaagaacaaaattcttgtggcttatcatgaaattgggcat
gcagtgtgtgcgactttgactccaggccatgatccagtacagaaagtcactctaatccca
aggggccaagcccgtggtctaacttggttcatacctggtgaagaccctgccctcatctct
aagcagcaactatttgctagaataattggaggccttggagggcgtgcagcagaggaagtg
atttttggagaatcagaaatcactacaggtgcaactggagacttgcaacaaatcactcag
atagcaagacagatggtaacaatgtttggcatgtctgagattgggccatgggcattgact
gatccagtactgcaaagcagtgatgtagtactaaggatgctagctagaaactctatgtca
gaaaagcttgcagaagacatagattcatcggtacgagatataatagaaagtgcatatgag
attgcaaagaaccacataagaaatagccgtgaagctattgataaactagtggatgttctc
ttggagaaggaaaccctcacaggtgatgaattcagggcaatcctatctgaattcacagat
atttcttccattaagctggatagaacccctattcgtgatttgatagaagcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (26)   
   Pfam (26)   
All databases (37)   

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