KEGG   Rahnella aquatilis HX2: Q7S_03025
Entry
Q7S_03025         CDS       T01850                                 
Symbol
rumA
Name
(GenBank) 23S rRNA m(5)U1939 methyltransferase
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
raa  Rahnella aquatilis HX2
Brite
KEGG Orthology (KO) [BR:raa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:raa03009]
    Q7S_03025 (rumA)
Enzymes [BR:raa01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     Q7S_03025 (rumA)
Ribosome biogenesis [BR:raa03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Q7S_03025 (rumA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 TRAM PCMT RrnaAD Methyltransf_25 MTS Cons_hypoth95 Methyltransf_11 Met_10 Methyltransf_4 Methyltransf_15 Ubie_methyltran Ribosomal_L22 CMAS Methyltr_RsmB-F Methyltransf_32 FtsJ DOT1 Methyltransf_23
Other DBs
NCBI-ProteinID: AFE56868
Position
663175..664491
AA seq 438 aa
MTATDLDTFGQGVARHNGKAVFVSGLLPGEQAEVTLTEDKSKYAKGKLKRLLTTSDDRVK
PLCPHYSTCGGCQQQHASEALQQRSKSAALLRLISRETGILADPLPVIAGPQYGYRRRAR
LGLQIAGVKPGRKAGAVSGPLVMGFRQEGSNDLVAITRCPVLRPELEQLLVPVQECLSSL
SAAKRLGHLEMVLADNGPLLVLRHLDPLSEADRARLTAFAAQHQLTIFLAPDSETLAPLC
GEPPYYQIDGLNLKFGPRDFIQVNDAVNQQMVAQALDWLELTPEDRVLDLFCGMGNFTLP
LAKRANQVVGVEGVATLVANGQDNARNNGLENVSFFHENLEDDVSKQPWAAQGFNKILLD
PARGGAAGVMTHIVKLAPARVVYVSCNPTTLARDSKILLEAGYRLAGVRMLDMFPHTGHL
ESMALFINPSDTGVVSET
NT seq 1317 nt   +upstreamnt  +downstreamnt
gtgaccgccaccgaccttgatactttcgggcaaggtgtggcacgccacaatggcaaagcc
gtatttgtcagtggtttactgcccggcgaacaggcagaagtcactttaacagaagataaa
agcaagtacgccaaaggtaagctgaagcgtttgctgaccaccagcgacgatcgggtaaaa
ccgctgtgtccgcactattccacttgcggcgggtgtcaacagcagcacgccagcgaggca
ttgcaacagcgcagtaaatcagcggcgttattacgcctgatttcccgcgaaaccggtatt
ctggcggatccgctgccagtgattgccggtccgcaatacggttaccgccgtcgtgcgcgt
ctgggattgcaaattgcgggcgttaaaccggggcgtaaagccggtgccgtcagcggcccg
ctggtgatggggttccgtcaggaaggctccaacgatctggtggcgattacccgttgcccg
gtgctgcggcctgagctggagcaactgctggtgccggtgcaggaatgtttgtcgtcatta
tcggcggcgaaacgcctcgggcatctggaaatggtgctggcggataacggcccgctgttg
gtgctgcgtcatcttgatccgctcagtgaagccgatcgtgcgcgcctgacggcgtttgcg
gcgcaacatcagttaacgatttttctggcgcctgacagcgagactctggcgcctttgtgc
ggcgaacccccttattatcagattgatggtttgaatctgaaatttggcccgcgcgatttt
attcaggtgaatgacgccgttaaccagcaaatggtggcgcaggccctggactggctggaa
ctgacgccggaagatcgcgtgctggatttgttctgcgggatggggaattttacccttccg
ctggcaaaaagagctaaccaggttgtcggcgtcgaaggtgttgctacactggtggcgaat
gggcaagataatgcccggaataatggattagagaatgtgtccttcttccatgagaatctg
gaagatgatgtcagtaaacaaccctgggcggcacaaggtttcaataaaatcttgctggac
ccggcccggggtggcgctgctggcgtgatgacgcatattgttaagcttgccccggcgcgt
gtggtgtatgtgtcatgcaaccccacaacattggcgcgggacagtaaaattttgttggag
gcgggttatcgtttggccggggtgcgtatgctggatatgttcccgcacaccggtcacctt
gaatcgatggctctgtttatcaacccgtctgacacaggtgttgtgtcagaaacgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (20)   
   Pfam (20)   
All databases (28)   

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