KEGG   Rahnella aquatilis HX2: Q7S_11350
Entry
Q7S_11350         CDS       T01850                                 
Name
(GenBank) exoribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
raa  Rahnella aquatilis HX2
Brite
KEGG Orthology (KO) [BR:raa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:raa03016]
    Q7S_11350
Enzymes [BR:raa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     Q7S_11350
Transfer RNA biogenesis [BR:raa03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Q7S_11350
SSDB
Motif
Pfam: RNB OB_RNB CSD2 S1 ODP
Other DBs
NCBI-ProteinID: AFE58500
Position
2509844..2511787
AA seq 647 aa
MFQDNPLLAQLKQQLHSQTPRVEGIVKGTEKGFGFLEVDGQKSYFIPPPYMKKVMHGDRV
IASLQTEKEREVVQPETLVEPFLSRFVGRVTKKDDRLSIIPDHPLLRDAIQCRVARSINH
EVNDGDWCVAEMRRHPLKEGDHSFQAEITEWITTGADDLAPWWVTLARHNLEREAPKSDI
AELRDEGLTREDLTALPFVTIDSGSTQDMDDALYVKDNSDGTLQMTVAIADPTAYVSEGS
ELDNIAKKRAFTNYLPGFNIPMLPRELSDDICSLWPDVSRPVLACSVTVGADGTLGSDIR
FFAATIESKAKLAYDDVSDWLEADEKSEWQPASEVIASQIRLLKRVCDVRSAWRTEHALV
FKDRPDYRFVLGEKGNVLEIIAEHRRIANRIVEESMIAANVCAAIALRDSLGFGVYNVHT
GFDPLLVENAVTVLQANDVEANAEELLTLPGFCALRRKLDALPTQFLDSRIRRFQTFAEI
STTPGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAMILQQSAEKPQDDMTIQLAERRRA
NRMAERDVGDWLYARYLEDKVGTDVKFSAEIIDVTRGGLRIRLQDIGAVAFIPAPFLHSV
RDELVCSADTGTVLIKGEVAYRQSDIIEVNIAEVRMENRNVIAKPAV
NT seq 1944 nt   +upstreamnt  +downstreamnt
atgtttcaagataacccgctgctcgcgcagctaaaacagcaacttcactctcagactccg
cgtgtcgaaggcatcgtaaaaggcactgagaaaggctttggctttcttgaagtagacggt
caaaaaagctatttcattccgcctccgtacatgaaaaaagtcatgcacggggatcgcgtt
atcgcttccctgcaaaccgaaaaagagcgtgaagtcgtccagccggaaacattggttgaa
ccttttctcagccgttttgttggccgcgtaacgaagaaagacgaccgtctttctatcatt
ccggatcatcctttattacgtgatgctattcagtgccgcgttgcccgcagcatcaatcat
gaagtgaatgacggcgactggtgtgtggctgaaatgcgccgtcacccgctgaaagaaggc
gaccacagcttccaggctgaaatcaccgaatggatcaccaccggcgccgacgatcttgcg
ccgtggtgggtcacgctggcacgtcataaccttgaacgtgaagcgccgaaatctgacatt
gccgagctacgcgatgaaggcctgacccgcgaagacctgaccgccctgccatttgtcact
atcgacagcggcagtacgcaggacatggatgacgcgctgtatgtgaaagacaacagcgac
ggcaccctgcaaatgactgtcgcaattgctgacccgacggcttacgtcagcgaaggcagc
gagctggacaacattgcgaaaaaacgcgcattcaccaactatctgccgggcttcaacatc
ccgatgctaccgcgtgaattgtccgatgatatctgttccctgtggccggacgtcagccgt
ccggttctggcgtgttctgtcacggtaggcgcagatggcacactgggcagcgacattcgt
ttcttcgcggcgactatcgagtcgaaagccaaactggcttatgacgacgtgtctgactgg
ctggaagcggatgagaaaagcgaatggcaaccggccagtgaggtgatcgcctcacagatc
cgcctgctcaaacgcgtctgcgacgtgcgcagcgcatggcgtaccgaacatgcactggta
tttaaagaccgtcctgattaccgcttcgtgctgggtgagaaaggtaacgtgctggaaatc
atcgccgagcatcgccgcattgctaaccgcatcgttgaagaatcgatgattgccgccaac
gtctgtgccgctatcgccctgcgcgacagcctcggtttcggcgtttataacgtgcatacc
ggttttgatcctctgctggtggaaaacgcggtcaccgtgctgcaggcgaatgacgttgaa
gccaacgctgaagaactgctgaccctgccgggcttctgcgctctgcgccgtaagcttgat
gcattgccaacccagttcctcgacagtcgcatccgtcgtttccagacctttgcagaaatc
agcaccactccggggccgcacttcggcctggggctggaagcttatgcgacctggacatca
cctatccgtaaatacggcgacatggtgaaccaccgtttgctgaaagcgatgatcctgcaa
cagtctgctgaaaaacctcaggacgacatgaccattcaactggcagaacgccgtcgtgcc
aaccgcatggccgagcgcgatgtcggtgactggttgtatgcccgttacctggaagataaa
gtcggcactgacgttaaattcagtgctgaaattatcgatgtcacccgcggcggcctgcgc
atacgtctgcaagatatcggtgccgtggcgttcatccctgctccgttcctgcacagcgtg
cgcgacgaactggtgtgcagcgccgataccggtactgtcctgattaaaggcgaagtggcc
taccgccagagcgacatcattgaggtgaacattgctgaagttcgcatggaaaaccgcaat
gtgatcgccaaaccggcagtctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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