KEGG   Rhodoferax antarcticus: RA876_04710
Entry
RA876_04710       CDS       T04655                                 
Name
(GenBank) RNA polymerase sigma factor RpoE
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
rac  Rhodoferax antarcticus
Brite
KEGG Orthology (KO) [BR:rac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rac03021]
    RA876_04710
Transcription machinery [BR:rac03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     RA876_04710
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_16 TnsD UBM CcmH
Other DBs
NCBI-ProteinID: APW45779
Position
969199..969840
AA seq 213 aa
MTDDLPPTAASPREPDSDAMLVERTVAGDQRAFELLVIKYQRRVERLIGRMVRDVDIVED
IAQETFIRAYRALHQFRGDAQFYTWLYRIAVNTAKKFLLDMKRDRTVSDSAMGPKDDDDE
TFRPRNEPSTDETPESVLAAKEIGQAVSDALAALPEDLRQAITLREMEGMSYEDIAQLMA
CPIGTVRSRIFRAREAISAKVRPMLDKQTGKRW
NT seq 642 nt   +upstreamnt  +downstreamnt
atgacggacgatttgccgccaactgctgcgtcacctcgcgagcccgacagcgacgccatg
ctggtggagcgcacagtcgccggtgatcagcgcgcgttcgaattgttggtcatcaaatat
cagcgcagggtcgagcgactgattggccgcatggtgcgcgacgttgatatcgtggaagac
attgcgcaggaaaccttcatccgcgcctaccgggccttgcaccagtttcgcggcgacgcg
cagttctacacctggctgtaccgcattgcggtgaatacggcgaagaagtttctgttggac
atgaagcgcgaccgcacggtgtcggacagcgctatgggcccaaaagacgatgacgatgaa
acttttcgccccagaaacgaaccaagcacagacgaaacccctgagtcggtgctggccgcc
aaagagattgggcaggcggtcagtgatgctttagcagctttgccagaagatttgcggcaa
gcgatcaccctgcgtgaaatggaggggatgagttatgaggatattgcgcaactgatggcc
tgcccgattggcacggtgcgctcgcgtatcttcagggcgcgcgaagccatctcggccaag
gtacggcccatgctggacaaacagacaggcaagcgttggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system