KEGG T04655: RA876

Rhodoferax antarcticus: RA876_04745

Entry

RA876_04745       CDS       T04655

Name

(GenBank) ribonuclease III

K03685

ribonuclease III [EC:3.1.26.3]

Organism

rac Rhodoferax antarcticus

Brite

KEGG Orthology (KO) [BR:rac00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rac03019]
    RA876_04745
   03009 Ribosome biogenesis [BR:rac03009]
    RA876_04745
   03036 Chromosome and associated proteins [BR:rac03036]
    RA876_04745
Enzymes [BR:rac01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     RA876_04745
Messenger RNA biogenesis [BR:rac03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     RA876_04745
Ribosome biogenesis [BR:rac03009]
Eukaryotic type
  90S particles
   RNase
    RA876_04745
Prokaryotic type
  rRNA processing factors
   RA876_04745
Chromosome and associated proteins [BR:rac03036]
Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     RA876_04745

SSDB

Motif

Pfam:

Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM

Other DBs

NCBI-ProteinID:

APW45785

Position

976357..977043

AA seq 228 aa
MSAGLAALQQRLQYQFSDLSLLARATTHRSFSADHNERLEFLGDSVLGVCVADLLYQRLS
ALPEGDLSRVRAGLVRQEALHPLAIKLGLGEVIRLGEGEMRSGGKKRPSILADALEAVIG
ATYLDGGFSAAQALVNRLYASLEINPAMAAMGKDPKTELQEWLQARRMKVPGYKVVATLG
AAHKQTFEVECEITELNLTARGTGGSRRAGEQAAATTMLQTLKTKGPQ

NT seq 687 nt +upstreamnt +downstreamnt
ttgagcgcggggctggcagcgctgcaacagcgcctgcagtaccaattttctgatctgagc
ctgcttgcgcgggccaccacccaccgaagcttttccgctgaccacaacgagcggctggag
tttctgggcgattcggtgctgggtgtctgcgtggcggatctgctttaccagcgactcagt
gcgctgccagaaggtgatttgtcgcgggtacgtgcgggtctggtgcgccaggaggcgttg
catccgctggctatcaagctgggtttgggcgaggtgatccgcctgggcgagggcgaaatg
cgctccggagggaaaaaacgcccgtctatccttgcagatgctttggaagctgtgattggt
gccacctatctggatggcggcttctctgcagcgcaggcgctggtgaaccggctgtatgcc
tcgctggaaatcaacccggccatggctgccatgggcaaagatcctaaaaccgaactgcag
gaatggttgcaggcgcggcgcatgaaagtgcctggttacaaagtcgtcgccacgctgggc
gcggcccacaagcaaacctttgaggttgaatgcgagatcaccgaactcaatctgacggcg
cgtggcacgggtggctcccgccgcgctggcgaacaagctgccgccaccaccatgctgcaa
acactcaagaccaaagggcctcaatga

All links

Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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