KEGG   Rhodoferax antarcticus: RA876_11595
Entry
RA876_11595       CDS       T04655                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
rac  Rhodoferax antarcticus
Pathway
rac03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    RA876_11595
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rac03400]
    RA876_11595
DNA repair and recombination proteins [BR:rac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RA876_11595
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG HHH_5 UVR HHH HHH_2 Pox_polyA_pol_N Mer2
Other DBs
NCBI-ProteinID: APW46896
Position
complement(2405842..2407881)
AA seq 679 aa
MSDLPEIPTSPESAHPEQLLSDVASLPALPGVYRYFDAQGQVLYVGKAINLKKRVSSYFQ
KNHGGTRIGHMVSKIVRLETTVVRSEAEALLLENNLIKTLSPKYNILFRDDKSYPYLKIS
APAPLSSDTKEIAVSALPIRATGQLSTQTPGVRMNADWFPLVSYYRGAVEKKNRYYGPYP
SAWAVKEAILLMQKVFKLRTCEDSVFSNRTRPCLLYQIKRCSGPCVGHISPTAYAQDVAD
AERFLNGDAQEVMLELEKRMMAHADKLEFEQAAELRNQVAALSNVLHQQSVDNVSDRDVD
ILAVKVQGGRACVNLAMVRGGRHLGDRPYFPVQVLDGAGMDVEDDGTPRRSVESQILDAF
IAQHYLNVPVPPSLVVSNPVDKGLLQALILQTGVKVSAEHHPRGQRRVWQEMAQTNANLQ
LARLLSEEGSQQARTRALVEALDLLIDNQDELRIECFDISHTAGESTQASCVVFHHHKMQ
NAEYRRYKITDITPGDDYAAMRQVLLRRYSKLAEVLQEAKRSGETPPGTGRLPDLVLVDG
GKGQVSMAREVFTQLGLDLSLIVGVEKGEGRRIGLEELVFADGREKVYLGKDSAALMLVA
QIRDEAHRFAITGMRAARAKVRMDGGRLEEIPGIGPKRRARLLQRFGGVRGVALASADDI
ATVEGISHELAEQIYRALH
NT seq 2040 nt   +upstreamnt  +downstreamnt
atgtctgatctgcctgaaattcccacgtcgcctgagagcgcgcaccccgaacagttgctc
agcgacgtggccagcctgcccgcgttgccgggcgtgtaccgctactttgacgcgcagggc
caggtactctatgtgggcaaggcgatcaacctgaaaaagcgcgtgtcgagctatttccag
aagaaccatggcggcacgcgcatcggccacatggtgagcaaaatcgtccggcttgagacg
accgtggtgcgctccgaggcagaagcgctgctgctggaaaacaacctcatcaagacgctc
agccccaagtacaacattctgtttcgggacgacaagagttacccgtatttgaaaatcagc
gcacctgcaccgttgtcaagcgatacaaaagagatagctgtcagcgctttacccataagg
gctacaggccaattaagcactcaaacgccgggcgtcagaatgaacgccgactggtttccc
ctggtgtcttattaccgtggtgcggtggaaaaaaagaaccgctactacggcccctaccca
agcgcctgggcggtgaaagaggcgattttgctgatgcaaaaagtgttcaaactgcgcacc
tgtgaagacagcgtgttcagcaaccgcacccggccgtgcttgctgtaccagatcaagcgc
tgctcgggcccgtgcgtggggcatatctcgcccactgcttatgcgcaggatgtggcggat
gccgagcgctttttaaatggtgacgcccaagaggtgatgcttgagctggaaaaacgcatg
atggcgcacgccgacaaacttgaattcgagcaggccgccgagttgcgcaaccaggtagcg
gcgctgtccaacgtgttgcaccagcagtcggtagacaacgtgagtgaccgtgacgtggac
attctggcggtgaaagtgcagggcggtcgtgcctgcgtgaacctggccatggtgcgtggc
gggcggcatctgggcgaccggccctactttccggtgcaggtgctggatggcgcgggcatg
gatgtggaagacgacggcacgccgcggcgctcggtggagtcgcaaattctggacgccttc
atcgcccagcactacctgaatgtgccggtgccgccatcgctggtggtgagcaacccggta
gacaaggggttgctgcaggccctgattttgcaaactggcgtcaaggtcagcgccgagcac
cacccgcgcggccagcgccgtgtctggcaggaaatggcgcagaccaatgccaacctgcag
ctggcccggctgctgtccgaagaaggctcgcagcaggcgcgcacccgcgcgctggttgag
gcgctggacctgctcatcgacaaccaggacgaactgcgcatcgagtgttttgacatctcg
cataccgccggtgagtcaacccaggcgtcttgcgtggtgtttcaccaccacaaaatgcaa
aacgccgaataccggcgctacaagatcaccgacatcacccccggcgacgactacgccgcc
atgcgccaggtgctgctgcgccgctacagcaaactcgccgaggtgttgcaggaggccaaa
cgcagcggcgaaaccccgccaggcacgggtcgcctgccggatctggtgctggtcgatggc
ggcaaaggccaggtcagcatggcgcgcgaggtgtttacgcaactggggctggacctgtcg
ctgattgtgggcgtggaaaaaggcgagggcaggcgcattggcctggaagagctggtgttt
gccgacgggcgcgagaaggtttacctaggcaaggattcggccgcgctgatgctggtggcg
cagatccgcgacgaggcgcaccgttttgccatcaccggcatgcgggcggcgcgtgccaag
gtgcgcatggatggcggacggctggaagaaatcccgggcattggccccaaacggcgcgcc
cgcttgttgcagcgctttggcggcgtgcgcggcgtggcactggcgtcagctgacgacatt
gcaacagtcgagggcatttcacacgaattggccgaacagatttaccgggcactgcattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system