KEGG   Rhodoferax antarcticus: RA876_12140
Entry
RA876_12140       CDS       T04655                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
rac  Rhodoferax antarcticus
Pathway
rac03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RA876_12140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rac03400]
    RA876_12140
Enzymes [BR:rac01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     RA876_12140
DNA repair and recombination proteins [BR:rac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     RA876_12140
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: APW46982
Position
2528279..2529118
AA seq 279 aa
MKLATWNVNSLTVRLAHVLDWLAANPVDVLALQELKLTDDKFPHAAFAQAGYSCQCFGQK
TYNGVALISRTPAWAVVKNIPGFDDDMARVISATFTLSTAPAEYSANESSLRNLNKGLRV
ICAYFPNGQEPGSDKFEYKLAWLDGLRAWLRTELQTYPNLVLMGDYNITFDDADVWDPEG
MRDQIHCTDEERYHLQALITLGLVDAHRLFAQPPKSYSWWDYRDMAFRRNRGMRIDHILV
SNALKTLVTACHIDKTPRKNERPSDHAPVVVDLQDPPRA
NT seq 840 nt   +upstreamnt  +downstreamnt
atgaaacttgccacctggaacgtcaactcactgaccgtgcgtttggcgcatgtgctggac
tggcttgccgccaacccggtggatgtgctggcgctgcaagagctcaagctgaccgacgac
aagtttccccacgccgcttttgcccaagctggttacagctgccagtgtttcggccagaaa
acctacaacggcgtggcgctgatctcgcgcacgcctgcttgggcggtagtgaaaaacatt
ccgggctttgacgacgacatggcgcgggtcatcagcgccacctttacgctgagcacggca
cccgctgaatactctgctaatgagagcagcttacgcaacttgaataagggcttgcgggta
atctgcgcctatttccccaacggccaggagcccggcagcgacaagtttgagtacaagctg
gcctggttggacggcctgcgcgcctggctgcgcaccgagctgcagacctaccccaatctg
gtgctgatgggcgactacaacatcacctttgacgacgccgacgtgtgggaccccgagggc
atgcgcgaccagatccactgcaccgacgaggagcgctaccacctgcaagcgctgatcacc
ctgggcctggttgacgcgcaccggctatttgcccagccacccaaaagctattcgtggtgg
gactaccgcgacatggcgttcaggcgcaaccggggcatgcgcattgaccacattttggtc
agcaatgcgcttaaaaccctggtcaccgcctgccatatcgacaaaaccccgcgcaaaaac
gagcgccccagcgaccacgcgccggtggtggtggacctgcaagacccgcccagggcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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