KEGG   Rickettsia africae: RAF_ORF0135Help
Entry
RAF_ORF0135       CDS       T00979                                 

Gene name
virB6-5
Definition
(GenBank) VirB6
  KO
K03201  type IV secretion system protein VirB6
Organism
raf  Rickettsia africae
Pathway
raf03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:raf00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RAF_ORF0135 (virB6-5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:raf02044]
    RAF_ORF0135 (virB6-5)
Secretion system [BR:raf02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   RAF_ORF0135 (virB6-5)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: TrbL HTH_3 DUF2501 SCP2_2
Motif
Other DBs
NCBI-ProteinID: ACP53106
UniProt: C3PME6
Position
146321..149782
Genome map
AA seq 1153 aa AA seqDB search
MNKNIFITLLISLLLLSGCTGDTCIDPDDFGFIKFNVSARYDPEEITSRQEGNQVAPWRD
SAYKVNGYPLTIMVRPWSYILGDKNTSGQLSAWCPWYGQKNNTTTLAAFCVKLQPCTFWD
NTRLDMCTPNPANQNDAMISNAPCIMTNGVGLYFLIAAKNTDPNISPDSQSKPQGITQHL
GEELTSGYEFYSTSSTGQFLEAGGINYQYKGEDKSKYAQSPLYFKIIDKFYNDNSGQYRL
VIKSGVTDTRPDPLQFLTDLIKGVLFGKDGIIKKTYQQIIDTSGYRMSVSAILTLYIMFT
GFSFLIGNINLTHVELIVRILKVSIVSILLSTDKAWTFFHDYLFVFFIDGVQQILQIINE
ASATGPGSQSLLGLLISPQTLSKLFSLLFVDWLGFIYIILYLIALYFIFFLIFKATIIYL
TALITIGMIIIMGPIFICFMLFNITRSLFENWLRQLISYALQPIILFTGIAFISMIIRTE
IYSTLGFAVCKHDFPNLGPINEIFGSFLEDIDPSLGHSIFYWWFPVPMKGGINNFHKANI
LVPKDHIIVDDSCKNDPDKCKHCAAYECIDERYIELPFLDLVKDAKRISNFINGKFVQLD
GILLIFVSIYLLSKFNDTAMSTAQFIAGTSGNLTEIQKVNQQSYESAAQQMNRPLNYVAK
TVSAPVTSRVSAGKEQVRMFFAEKFENMMMGRLEKQALGSSANKTVQNEVKRKYGIDSKD
VKMNAITDYENGIAGLLKNLPKGNELKAKELSQMKFTQLRDKIAANKYGVKDYTALSKEQ
KAELDKSLKDANLRELASDANFTRDYQDAYKNAHQEMSGRGVGLFGKNIGVLRSWQEIKH
RVDTKRKLKEEQRVGIGEKIYAGYTGIKRGALTAIVGKDLRDAYEGNLTSAEWHDFEYND
PRLRTYSEKLKDDEKAREHEELQMHINKEALAAQADILSPEYLARLEKAGRHSDVEYYQE
LAQRKLIHEVHGRLFEEGEPVMMGDRFMCEKATDSQMRDMIDNAHRKYAEFIDGDRYIRR
QEHYDIMHEKAQENLEQTYKELKDHFKRDDIKIEEMPALIAQKVKDTAEGAEIDQKITEE
LNNFNADVKNYEYSTEVLNKIEDRKQAITDEVNAQIDKINKYRENAKMQTYVKPIVNEGR
KLRKLEDHLRNMK
NT seq 3462 nt NT seq  +upstreamnt  +downstreamnt
atgaacaaaaatatttttattacattattaatatcgctattgctgctttccggttgtacc
ggcgatacttgtattgaccctgatgatttcggttttatcaaattcaatgtctctgctaga
tatgatccggaagaaattacttcaagacaggaaggtaatcaggtagcaccatggcgtgat
agtgcttataaagtaaacggctatcctttaaccattatggtaagaccgtggagttatata
cttggcgataaaaatacttcaggtcagttatctgcatggtgtccatggtatggtcaaaaa
aataacacaactactttggctgctttttgtgttaagctacaaccgtgtactttttgggat
aatactagacttgatatgtgtactcctaatcccgcaaatcaaaatgatgcaatgattagt
aatgctccatgtataatgacaaacggtgtcgggctttattttcttattgccgctaaaaat
accgatcccaatatttcaccggactcacagagtaaaccgcaaggtataactcagcattta
ggagaggagcttacttcgggctatgaattttatagtactagtagtacaggacaattcttg
gaagccggcggtataaattatcaatataaaggtgaagataagtcaaaatatgctcaatct
cctctttattttaagattatagataaattttataatgataatagcgggcaatatagatta
gtaataaagtctggagttactgatactagacccgatccgctacaatttttaacggattta
ataaaaggagtattatttggtaaggatgggattataaagaaaacttatcaacaaataatt
gatacgtcgggttataggatgagtgtctcggctattttaactctatacataatgtttaca
ggtttttcctttttaataggtaatataaaccttactcatgtcgaacttatagttagaata
ttaaaagttagtatagtctcaatattattaagtactgataaagcttggacattttttcat
gattatttattcgtattttttattgatggggttcagcaaatactgcaaataattaatgaa
gcttcggctaccggtcctggttctcaaagcttgcttgggttacttatttctcctcaaact
ttatctaaattattttctttactatttgttgattggcttggttttatatatatcattcta
tatttaatagccttatattttattttctttcttatatttaaagccactattatctatcta
accgctcttataactatcgggatgattataattatgggaccgatatttatttgtttcatg
ttgtttaatataactcgttcgttatttgagaattggttaagacaattaatatcatatgca
ttacagcctataattttatttaccggtatcgcttttatttcaatgatcatcagaaccgaa
atatattcaacgcttggttttgcagtatgtaaacatgattttcctaatttaggtccgata
aatgaaatattcggtagcttccttgaggatatagatccaagcctgggtcattcaatattt
tattggtggtttccagtaccgatgaaaggcggtataaataatttccacaaagcaaatata
ttagttcctaaagatcatataatagtagatgattcttgtaagaatgaccctgataaatgt
aagcattgtgctgcgtatgagtgtatagatgaacgctatattgaattaccgtttttagat
ttagttaaagatgcaaaaagaattagtaattttataaatgggaaatttgtccaacttgac
gggatattactaatttttgtgtctatttatttgctaagtaaatttaacgatactgctatg
tcaacggcacaatttattgctggtacttcaggtaatttaacagaaatacaaaaagttaat
cagcaatcttatgaatctgcagcgcaacaaatgaatagaccgctaaattatgtggctaag
acggtaagtgcacctgtaactagccgtgtaagtgcagggaaagagcaagttcgtatgttt
tttgccgagaaatttgaaaatatgatgatgggaaggcttgaaaagcaagctctcggttct
tcagcaaataaaaccgtacaaaatgaggttaagagaaaatacggtatagattctaaagat
gtaaaaatgaatgctattacggattatgaaaacggtattgcaggattattaaagaattta
cctaaggggaatgaattaaaagcaaaagaactatcgcaaatgaagtttactcagcttcga
gataaaattgctgcaaataaatatggagtgaaagattacactgctttaagtaaagaacaa
aaagctgagcttgataagtcattaaaagatgctaacttacgtgaactcgctagcgatgca
aactttactagagattatcaagatgcttataaaaatgctcaccaagaaatgtccgggcga
ggtgttggtctgtttggtaagaatataggagtgcttagaagttggcaagagataaagcat
cgtgttgatacaaaacgtaaattaaaagaagaacagcgtgtaggtataggcgaaaaaata
tatgcaggttatacaggaataaaaagaggagctttaactgcaatagtcggtaaagattta
cgtgatgcttatgagggtaatctaaccagtgccgaatggcatgattttgaatataacgat
ccaaggcttagaacttatagcgaaaaattaaaagatgatgaaaaagcacgagaacatgaa
gagctccaaatgcatattaataaggaggcgctagctgctcaagcagatatattatcaccg
gaatatctagcaagactagaaaaagcaggtagacatagtgatgtggaatattatcaagaa
ttagctcaaagaaagcttattcatgaggtgcatggtaggttatttgaggaaggtgaaccg
gtaatgatgggcgacagatttatgtgtgagaaagctactgattctcagatgcgcgatatg
atagataacgctcatagaaaatatgcagaatttatagatggagatcgatatattcgtcgc
caagagcattatgatattatgcacgagaaagcccaggaaaatttagagcaaacttataaa
gagcttaaagatcatttcaaaagagatgatatcaagatcgaagaaatgccggcattaata
gcacaaaaagttaaagataccgccgagggagctgaaatagaccaaaagattacagaagag
cttaataactttaatgctgatgttaaaaattatgaatatagtactgaagtattaaataaa
atagaggatagaaagcaagccattaccgatgaagtcaatgctcagatcgataagattaat
aaatatagagaaaatgccaaaatgcaaacctatgtaaagcctatagtaaacgagggtaga
aagctaagaaaattagaagatcatttaagaaatatgaagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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