KEGG   Riemerella anatipestifer RA-CH-1: B739_1760
Entry
B739_1760         CDS       T02331                                 
Name
(GenBank) Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
rag  Riemerella anatipestifer RA-CH-1
Brite
KEGG Orthology (KO) [BR:rag00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rag03032]
    B739_1760
   03400 DNA repair and recombination proteins [BR:rag03400]
    B739_1760
Enzymes [BR:rag01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     B739_1760
DNA replication proteins [BR:rag03032]
 Prokaryotic type
  DNA Topoisomerases
   B739_1760
DNA repair and recombination proteins [BR:rag03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      B739_1760
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C
Other DBs
NCBI-ProteinID: AFR36344
UniProt: J9R3A9
Position
1839977..1842502
AA seq 841 aa
MHKEGERLIPINIVDEMKSSYIDYSMSVIVSRALPDVRDGLKPVHRRVLYGMYGLGVFSN
KKYLKSARIVGDVLGKYHPHGDRSVYDAMVRMAQPWSLRYPQVDGQGNFGSMDGDPPAAM
RYTEARLKKISDEILSDLDKETVDFQNNFDDSLQEPTVLPTKIPNLLVNGTSGIAVGMAT
NMAPHNLSESVDAICAYIDNKEIEIDELMKYIIAPDFPTGGIIYGYDGVRDAFHTGRGRI
VLRAKVAFEEIGNRNAIIVTEIPYLVNKAEMIARTSELVKEDKIQGIHEIRDESDRRGMR
VVYELKNDAIPNVVLNLLYKYTALQTSFSVNNIALVKGRPQQLNLKDIIVHFVEHRHEIV
IRRTQYELKKARERAHILEGFMKVIATQDTLDKAISIIRHSATPQAAKEGLIAEFELSDI
QAQAILDLRLARLTGMELDKIRDEYKAIMDLINDLEDILANEARRYQIIKDELLEVKEKY
GDERRTEIDYSGGEMSIEDFIPNEEVVLTISHAGYIKRTLLSEYKTQSRGGVGNRAASTR
DEDFLEYIVSATNHQYMLFFTEKGKCYWLRVFEIPEGSKTAKGRAIQNLINIEPDDKIKA
YIRTNDLKDSEYVKQMYVVMITKNGTIKKTSLEAYSRPRTNGIHAIEIREDDQLLGARLT
NGNSEIMIATKNGKCIRFPEEKARAVGRTSIGVRGISLEDNDEVIGMIVVNDIENETVLV
VSEKGYGKRTAVEDYRVTNRGGKGVITLNITEKTGQLIAIQSVVDGNDLMIINKSGVAIR
MSVDNMRVMGRNTQGVRLINLKNNDEIAAVAKVEAEKDVEDEEMEESNDETVNPSEGNSE
E
NT seq 2526 nt   +upstreamnt  +downstreamnt
atgcataaagaaggagaaaggttgatacctatcaatattgtggacgaaatgaagtcctct
tatattgactactcaatgtccgttattgtatctcgtgccttgccagatgtaagggacgga
ttaaaacctgtacatcgtagggttttatatggtatgtatggattgggagttttttcaaat
aaaaaatatttaaaatctgccagaattgtaggagatgttttgggtaaataccacccacac
ggtgatagatctgtttatgacgctatggtgcgtatggcacaaccgtggagtttaaggtat
ccgcaagtagatggtcaaggtaactttggttctatggacggtgacccaccagcagctatg
cgttataccgaagccaggctgaaaaaaatatccgatgaaattctatcagacttagataaa
gaaactgttgattttcaaaataacttcgatgatagtttacaggagcctacagtgttgcct
actaaaatacctaaccttttagtaaatggtacttctggtattgcggtaggtatggcaact
aatatggcgcctcataacttatcggaatcggtagatgctatctgtgcctacatagataat
aaggagatagaaatagatgagttaatgaaatacatcatcgctcctgacttccctacggga
ggaattatctacggctatgatggagttagagatgcgttccatacaggaagagggcgaatt
gtattaagagctaaagtcgcttttgaagagattggaaaccgtaatgccattatcgttacc
gaaatcccttatctggtgaacaaagctgaaatgatagctagaacatcagagttggtaaaa
gaggataaaatacaaggtattcacgaaattagagacgagtctgataggagaggtatgcgt
gtggtttacgaacttaaaaacgatgcaatacctaatgtagttcttaacctattgtataaa
tatacggcgttacaaacttcgtttagtgttaataatattgccttagtaaagggtagacca
caacagcttaacttaaaagatattattgttcactttgtggagcatcgtcacgagattgta
attcgtagaacccagtatgagcttaaaaaagcaagagaaagagctcatatcttagaaggt
tttatgaaagttattgcaactcaggatactttagataaggcaatttctatcattaggcat
tcagcaacgccacaagctgctaaagagggattgattgcagagtttgaactttcagatata
caggctcaagccatcttagatttaagattagctaggcttacaggtatggaattagataaa
atccgtgatgagtacaaagctattatggatttaattaacgacttggaagatatccttgct
aatgaagctagacgctaccaaatcattaaagatgaactgttagaagttaaagaaaaatat
ggcgatgaaagaagaacggaaatagattattctggaggtgaaatgtccatagaagacttt
atccctaacgaagaggtggtacttaccatatctcacgcaggatacatcaagagaaccctc
ctttcagaatacaaaactcagagtagaggcggagtgggcaaccgcgcggcatctacaaga
gacgaggatttcttagaatatattgtttctgcaaccaatcaccagtatatgctattcttt
acggaaaaagggaaatgctactggttgagagtatttgaaattcctgaaggttccaaaacg
gcgaaaggtagagcaatacagaacttaatcaatatagaacctgatgataaaatcaaggct
tacattagaaccaatgatttaaaggactctgagtatgttaagcagatgtatgtggtaatg
attaccaaaaacggaacgatcaagaaaacttcgttagaggcttattctagacctagaacc
aacggtatccacgccatagaaattagagaggacgaccagcttctaggagcaagacttacc
aacggtaactccgagataatgatagctactaaaaatggtaaatgtatccgtttcccagaa
gagaaagcaagagcagtgggtagaacttccattggagtaagaggtatttctctagaagac
aacgacgaggtaattggtatgatagttgtaaatgatatagagaatgaaactgttttagta
gtttctgaaaagggctatggtaagagaactgcagtagaggattatcgtgtgactaaccgt
ggaggtaaaggagtgattaccctcaatattaccgaaaaaacgggacaacttattgcgata
caatcagtagtagatggtaacgatttaatgattatcaataaatcaggggttgcaataaga
atgtcggtggacaatatgcgtgttatggggagaaatacccaaggtgtaaggctaattaat
cttaaaaacaatgatgagatagcggccgtagcaaaagtggaggcagagaaagatgtagag
gatgaagaaatggaagaatctaatgatgaaactgtaaatccgtctgaaggaaattcagag
gaatag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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