KEGG   Rahnella aceris Y9602: Rahaq_4263
Entry
Rahaq_4263        CDS       T01422                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
rah  Rahnella aceris Y9602
Pathway
rah03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rah00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Rahaq_4263
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rah03021]
    Rahaq_4263
   03019 Messenger RNA biogenesis [BR:rah03019]
    Rahaq_4263
Transcription machinery [BR:rah03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Rahaq_4263
Messenger RNA biogenesis [BR:rah03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Rahaq_4263
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT AAA_25 OB_RNB AAA_22 AAA FtsK_SpoIIIE
Other DBs
NCBI-ProteinID: ADW75849
UniProt: A0A0H3FFL9
Position
complement(4657822..4659081)
AA seq 419 aa
MNLTELKNTPVSDLIALGENMGLENQARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQD
GFGFLRSGDSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARSKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIATSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLARKIAEKRVFPAIDY
NRSGTRKEELLTTSEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgaatcttaccgaattaaagaatacgccggtctctgacctgattgcactcggcgaaaat
atgggactggaaaaccaggcccgcatgcgcaagcaagacattatcttttcaatattgaag
cagcatgcgaaaagcggagaagacatcttcggtgatggcgtactggagatattgcaggat
ggatttggtttcctccgctccggagacagttcctacctcgcaggccccgacgacatctac
gtatctccaagccaaatccgccgcttcaaccttcgtactggcgacaccatttccggtaaa
atccgcccacctaaagaaggtgaacgttattttgccctgttgaaagttaacgaagttaac
tacgacaaaccagaaaacgcccgcagcaaaatcctgtttgaaaacttaacccctctgcac
gcaaattcacgtctgcgtatggaacggggtaacggttcaacagaagatttgaccgctcgc
gtactggacttagcgtctccaattggccgtggccaacgtggtctgattgttgcgccgccg
aaagccggtaaaaccatgctgctgcaaaacatcgcgaccagcattgcgtataaccaccct
gattgcgtactgatggttctgctgattgacgaacgtccggaagaagtgaccgagatgcag
cgtctggtgaaaggcgaagttatcgcttccacctttgacgaaccggcatcccgacacgtt
caggtcgccgaaatggtgatcgagaaggcgaagcgtctggttgagcataagaaagatgtg
atcattctgctggactccattacccgcctggcacgtgcttacaataccgtggtaccggct
tcaggcaaggtactgaccggtggtgtggacgccaacgccttgcaccgtccaaaacgtttc
ttcggtgctgcgcgtaacgtggaagagggcggcagcctgaccatcatcgctactgcgctg
gtcgataccggttctaaaatggatgaagttatctatgaagaatttaaaggtaccggtaac
atggaattacatctggcgcgtaaaatcgctgaaaaacgtgtattccctgccatcgactac
aaccgctctggtacccgtaaagaagagctgttgaccacttctgaagaactgcaaaaaatg
tggatcctgcgtaaaatcattcatccgatgggtgagattgatgcgatggaattcctcatc
aacaagcttgcaatgactaagacaaatgacgacttcttcgacatgatgaaacgttcgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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