KEGG   Raineyella fluvialis: Rai3103_13010
Entry
Rai3103_13010     CDS       T06259                                 
Name
(GenBank) AAA family ATPase
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
rain  Raineyella fluvialis
Pathway
rain03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rain00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Rai3103_13010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rain03400]
    Rai3103_13010
Enzymes [BR:rain01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Rai3103_13010
DNA repair and recombination proteins [BR:rain03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Rai3103_13010
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C AAA_30 UvrD_C_2 PDDEXK_1
Other DBs
NCBI-ProteinID: QGF24420
UniProt: A0A5Q2FBJ6
Position
complement(2838499..2841822)
AA seq 1107 aa
MSTIPLHAEVSPALDLAAPLPSGTTLLEASAGTGKTHTIASLVVLSVARGTPLRSMLLIT
FTRKAARELRTRVRARLAEALQMLSAPPTPDEEPVWQALRAGLPRTTQHRLREALTDFDA
ATIATIHEFAGTMLDRLGLLSGHRRDAVLLPDHHAITAEVCDDLFLARFGSLARPPFEPQ
VARLLAATAVGTPAAPIVPDPTDDDLTRARVDFAVRARQEVDRRLRDRGLYTYDDLIGRL
ASALRHPATAAATAKRLRDAFGVVMVDEFQDTDPRQWEILRTAFHGHSDLFLIGDPKQAI
YGFRGGDVQTYLAAAREADRRLTLATNWRSDETVVRAIDSVLGRTALGDPGITLGEVRAK
HAGSRLRDPVGTPCPGLELRRVTRPYTSISAQRERIRRDAVAVVARLLSDGTTLEEGDVT
RPLRPRDIAVLVRFNHAATRMARALIAAGIPAVVNGADSVLRSPSATAWRELLATLLDPQ
PSAVHRLALGPFVGWGLDELIRADEDDRASLFIRVRSWGRLWTEHGVAAVLDAALDEADL
AGRSITRTGSEREITDLRHLGQLLHEAETGGHLAPRRLLTWLDEAIAVASRTGDDAQALR
LETEAEAVQVITVHSAKGLEFPIVLLPDMTDQKPAQDDAVPEAFTVHDRAGDRLVDVGGR
RDASSRARHRLALEESAGEQLRVLYVAMTRAASQIIAWWAPHQGYAPASPLQRVLFGDRG
GDGTLPRTVPVAPDQDPPALPGVALAYVADEAEPVEPPALPVALPAPHLRRFDRPLDTTW
RRTSYTGLTASLHDGSHGAAGTGDGRPDDEPAVDDTTAPALAEGGAEAPVERQLSPWGPL
PTGARFGTLVHAVLESWDPAGPPFDALVDSVAAASPLEGLDHRVLAASLDGAVRTPLGAD
LAELALADIALTDRLSELDFELPLGGGDQPGAPALLADIADALDRHLSPEDPLAAYAERL
RQPGLGDQTLRGFLTGSIDAVLRVGGRDPRFVVVDYKTNWLGGPPSDGTLPLAAYAPSAL
AGAMMTAHYPLQALLYSVALHRFLSWRLPAYRPEDHLGGIRYLFLRGMTGPATPTEEGVP
YGVFAWRPPAALIVEISRMVTEGRTRP
NT seq 3324 nt   +upstreamnt  +downstreamnt
atgagcaccatccccctgcacgccgaggtctcccccgcgctcgacctggccgcgcccctg
ccgagcggcacgacgctgctcgaggcgagcgccggcacgggcaagacccacaccatcgcc
tccctcgtcgtcctctccgtcgcccgcgggacgcctttgcgctcgatgctgctgatcacg
ttcacgcgcaaggctgcacgtgaactgcgtacccgggtccgggcccggctggccgaggca
ctccagatgctcagtgctcctcccacgccggacgaggaaccggtgtggcaggccctgcga
gcaggtctgccgcggacgacccagcaccgcctgcgtgaggcgctcaccgatttcgacgcc
gcgaccatcgcgacgatccacgagttcgccgggacgatgctcgaccggctcggcctgctc
tcgggccaccggcgggacgccgtcctgctgcccgaccaccacgccatcaccgcggaggtc
tgcgacgacctcttcctggcgcgcttcggcagcctcgcgcgcccgccgttcgaaccacaa
gtggcgaggcttctcgccgcgaccgcggtgggaacgcccgccgcgccgatcgtgccggat
ccgaccgatgacgacctgacgagggcccgggtcgacttcgccgtccgggcccgccaggag
gtcgaccgccggctgagggaccggggcctctacacgtacgacgacctgatcgggcgcctc
gcctccgccctgcggcacccggcgacggccgcagcaacggcgaagcggctgcgggacgcc
ttcggggtggtgatggtcgacgagttccaggacaccgatccccgccagtgggagatcctc
cggacggccttccacggccacagcgacctgttcctcatcggcgaccccaaacaggccatc
tacggcttccgcggcggggacgtacaaacctacctggctgccgcccgggaggcggaccgt
cgcctgaccctggccaccaactggcgctccgacgagaccgtcgtccgagccatcgactcc
gtcctgggccgcacggccctcggcgatcccggcatcaccctcggcgaggtccgggccaag
cacgccggctcacggctccgggatccggtcgggaccccgtgcccgggactggagctgcgc
cgggtcacccgcccctacaccagcatcagcgcgcagcgggagcggatccggcgcgacgcc
gtggccgtggtggcccgcctgctgagcgatggcaccaccctcgaggaaggcgacgtgacc
cgcccgctacgtcctcgcgacatcgccgtgctcgtacggttcaaccacgccgccacccgg
atggcccgcgccctgatcgccgctggcatcccggcggtggtcaacggggcggacagcgtc
ctgcggtcgccgtcggccaccgcgtggcgcgagctgctcgccaccctgctcgacccccag
cccagcgcggtccaccggctcgcgctcggccctttcgtcggctgggggctcgacgagctg
atccgcgctgacgaggacgaccgggccagcctgttcatccgggtccgctcctgggggcgg
ctgtggacggagcacggtgtcgcagctgtgctcgacgccgccctcgacgaggctgacctc
gccggccgatccatcacccgcaccggctcggagcgggagatcaccgaccttcgtcatctg
ggccaactgctccatgaggcggagaccggcggtcacctcgctccgcgacggctcctcacc
tggctcgacgaggccatcgccgtcgcgagccgtacgggcgacgatgcccaggccctgcgc
ctggagacggaggcggaggccgttcaggtcatcacggtgcactccgccaaggggctggag
ttcccgatcgtcctcctgcccgacatgaccgaccagaagccggcccaggacgacgccgtt
cctgaggccttcaccgtgcacgaccgcgccggggaccggctcgtcgacgtcggcgggcgt
cgggatgcgtcctcgcgggcccgccaccgcctcgccctggaggagagcgccggggagcag
ttgcgtgtcctgtacgtcgcgatgacccgggctgcctcccagatcatcgcctggtgggcc
ccgcaccaggggtatgcccctgcctcaccgttgcagcgggtgctcttcggtgaccggggc
ggcgacggcacgctgccgcgcacggtgcccgtcgcgccggaccaggatcctcccgccctg
ccgggagtcgccctcgcgtacgtggccgacgaggccgagcccgtcgagccgccggcgcta
cccgtcgcgctgccagcgccgcacctgcgacggttcgaccgcccgctcgacaccacctgg
cgacgcacctcctacaccggcctgaccgcctcactccacgacggatcgcacggggcggcc
ggcaccggtgatggccgtcccgatgacgagccggcggtcgacgacaccaccgcaccggcc
ctggcagagggcggtgccgaggcgcccgtcgagcggcagctctcgccctggggtccgctc
ccgaccggcgcccgcttcgggacgctcgtccatgccgttctcgagtcctgggaccccgcc
ggtccaccgttcgacgccctcgtcgacagcgtcgccgccgcgtcacctctggaagggctc
gatcaccgggtcctggcggccagtctcgacggtgcggtgcgcactcctctgggagccgac
ctggccgagctggcgctggccgacatcgccctcaccgaccgcctcagtgagctcgacttc
gagctgcccctcgggggtggcgaccagcccggtgcgccggccctgctcgccgacatcgcg
gacgccctcgaccggcacctttcccccgaggacccactggccgcgtacgctgagcggctg
cggcaaccgggactgggtgaccagacactgcgcggattcctcaccggtagcatcgatgcc
gtgctgcgggtcggtgggagggacccccggttcgtggtggtggactacaagacgaactgg
ctcggcggcccgccgtcggacggcacgctcccgctggcggcgtacgccccctcggctctg
gccggcgcgatgatgaccgcccactaccccctgcaggccctgctctactcggtcgccctg
caccgtttcctctcctggcggctacccgcctaccgtccggaggaccatctgggcggcatc
cgttacctcttcctgcgggggatgacagggcccgccacaccgaccgaggagggcgtgccg
tacggcgtcttcgcctggcgaccgccggccgccctgatcgtggagatcagccgaatggtc
accgagggaaggacacgaccatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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