KEGG   Ruminococcus albus: Rumal_0188Help
Entry
Rumal_0188        CDS       T01387                                 

Definition
(GenBank) methionyl-tRNA synthetase
  KO
K01874  methionyl-tRNA synthetase [EC:6.1.1.10]
Organism
ral  Ruminococcus albus
Pathway
ral00450  Selenocompound metabolism
ral00970  Aminoacyl-tRNA biosynthesis
ral01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ral00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    Rumal_0188
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Rumal_0188
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ral01007]
    Rumal_0188
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ral03016]
    Rumal_0188
Enzymes [BR:ral01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.10  methionine---tRNA ligase
     Rumal_0188
Amino acid related enzymes [BR:ral01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   Rumal_0188
Transfer RNA biogenesis [BR:ral03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    Rumal_0188
 Prokaryotic type
   Other AARSs
    Rumal_0188
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: tRNA-synt_1g tRNA-synt_1 tRNA_bind tRNA-synt_1e Anticodon_1 tRNA-synt_1f DUF1272 DALR_1
Motif
Other DBs
NCBI-ProteinID: ADU20745
UniProt: E6UCF3
Position
complement(188955..190910)
Genome map
AA seq 651 aa AA seqDB search
MAKEKFYITTAIAYASKKPHIGNTYEVVFTDAIARFKRMQGYDVFFLTGTDEHGMKIEGL
AKEEGISPKEHVDKVAGEIKDICKCMNISYDGFIRTTDEQHEKVVQKIFNKLYEQGDIYK
GSYEGMYCVPCESFWTQSQLVDGKCPDCGREVKPAHEEAYFLKLSKYQQWLEDYIETHPD
FIVPESRKKEMLNNFIKPGLQDLCVSRTTFTWSIPVTFDPKHVIYVWIDALSNYITALGY
DPDGSSEQFKKYWPCDCHVIGKDIMRFHSIYWPIMLHALGVEIPKKLFGHNWILFGEDKM
SKSKGNVIYADEVVDTFGVDGARYYLLSEMGLNGDGSITYESLIERYNSDLANTLGNLVN
RTVAMTKKYFGGEIRQPEVKEPVDDELIALAVETPKKVADLIDQYRMADAMEAIMTLARR
ANKYIDETEPWVLGKDEAKFGRLSTVLYNLLETIRFLGVILEAFMPETSEKILTQIGTDV
KGFDSLNEFGGLKVGSSVGDPVPLFARIDAAKFMEEAEAKMAAQAAAAAAEEAADAFEPV
PLAEQITIDDFAKVELRVAEVKECEKVKKSKKLLCLQLDDGFGGRQVVSGIAAWYKPEDL
IGKKVIIVANLKPVTLCGVESNGMICAADAPDGSARVIFPDQTLPNGAKLR
NT seq 1956 nt NT seq  +upstreamnt  +downstreamnt
atggctaaggaaaaattttatataacaacagctatcgcttatgcgtctaaaaagccccat
ataggcaacacctatgaggtcgtattcaccgacgctatcgcccgcttcaaaaggatgcag
ggctatgacgttttcttcctcacaggtacggacgagcatggcatgaagatagaaggtctt
gctaaggaagagggtatctctcccaaggagcacgttgacaaggtagcaggcgagataaag
gatatctgcaagtgcatgaatatatcttacgacggctttatcagaactaccgatgaacag
cacgaaaaggtagttcagaagatattcaacaagctttatgagcagggcgatatctacaag
ggttcttacgagggtatgtactgcgtaccctgcgagagcttctggacacagtcacagctg
gttgacggcaaatgtcccgactgcggacgtgaagtaaagcccgcacatgaggaagcatac
ttcctgaagctttccaagtatcagcagtggctggaagattacatcgagacacatcccgat
ttcatcgttcccgagagccgcaagaaggagatgctcaacaacttcatcaagcccggtctt
caggatctctgtgtttcgagaacaactttcacatggtcgatacctgttacattcgacccc
aagcacgttatctacgtatggatagatgcgctttcaaactatattacagcactgggctat
gatcccgacggcagcagcgagcagttcaagaagtactggccctgcgactgccacgttatc
ggcaaggatataatgagattccattctatctactggcctatcatgcttcatgcactgggc
gttgagatacccaagaagctcttcggtcacaactggatactcttcggtgaggacaagatg
agcaagtccaagggtaacgttatctatgctgatgaagttgtggatacctttggtgttgac
ggcgcaagatactatctgcttagcgagatgggtcttaacggtgacggttcaataacttac
gaatcacttatcgagagatacaattccgaccttgcaaatactctgggcaatctggtgaac
agaactgttgccatgaccaagaagtatttcggcggtgagatacgtcagcccgaggtgaaa
gagcctgttgatgacgagcttatcgctcttgcagttgaaactcccaagaaggtggctgac
cttatcgaccagtaccgtatggctgacgctatggaagctataatgacactggcaagacgt
gcaaacaagtacatcgacgagacagagccgtgggtactgggcaaggacgaagccaagttc
ggcagactttccacagttctctacaacctgcttgaaactatccgtttcctgggtgttata
ctcgaagcattcatgccagagacaagcgagaagatactcactcagatcggcacagatgta
aagggctttgacagcctgaacgaattcggcgggctgaaagtcggcagcagtgtgggcgat
cctgttccgctgtttgcaagaatagacgctgctaagttcatggaggaagctgaggctaag
atggctgcacaggcagcagctgctgcggctgaagaagctgctgacgcattcgagcctgta
cctcttgcagagcagatcacaattgatgactttgcaaaggtcgagctgagagtggcagag
gtcaaggaatgtgagaaggtaaagaagtccaagaagctcctttgcttacagcttgatgac
ggtttcggcggcagacaggtagtcagcggtatagctgcatggtacaagcccgaagacctt
atcggcaagaaggtcatcatcgtagcaaacctgaagcctgttacactctgcggtgttgaa
tccaacggaatgatctgcgcagcagatgctcccgacggttctgcaagggtgatattcccc
gaccagacactgcctaacggtgctaagctgagataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (109)   
   KEGG ORTHOLOGY (1)   
   RefGene (106)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (137)   

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