KEGG   Ruminococcus albus: Rumal_3219
Entry
Rumal_3219        CDS       T01387                                 
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ral  Ruminococcus albus
Pathway
ral03030  DNA replication
ral03430  Mismatch repair
ral03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ral00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Rumal_3219
   03430 Mismatch repair
    Rumal_3219
   03440 Homologous recombination
    Rumal_3219
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ral03032]
    Rumal_3219
   03400 DNA repair and recombination proteins [BR:ral03400]
    Rumal_3219
Enzymes [BR:ral01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Rumal_3219
DNA replication proteins [BR:ral03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Rumal_3219
DNA repair and recombination proteins [BR:ral03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Rumal_3219
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: ADU23682
UniProt: E6UG08
Position
3610712..3611599
AA seq 295 aa
MKVHNHDYPDHKTARQWAKQGFLPIDGAEGIELWANQFCQNKYIYYGPDEVSKATPDQLS
NFFRFERENRNQREKEKRKHRNAELIAENKELRKENNLLELSLCELERTAIRLMRNVDIS
PEKSADTIIIDTETTGLSELDDELLQVSIIDDAGNVLYNSYLRPLYHTSWKEAECVNNIT
PRMVAEAPTIYDEMPKINAIIKAAKKIIGFNTGFDENFLYFSGGISWMNKEVVDVMTMFA
PIYGEWSEQYDDYKWQNLIKAADYYDYDWSSRPGEAHNSLADCYATLYVYNKIIE
NT seq 888 nt   +upstreamnt  +downstreamnt
atgaaagtacataatcacgattatcccgaccacaaaaccgcaaggcagtgggcaaaacaa
ggctttttaccaatagatggggcagaaggaatagagttatgggcaaatcaattttgtcag
aataaatacatctattacggacccgatgaagtatccaaggctacacccgatcagctttct
aactttttccgctttgaacgagaaaaccgaaatcaaagagaaaaagaaaaaaggaagcac
agaaacgctgaactaattgcagaaaacaaagagcttagaaaagagaataatctacttgaa
ttatccttatgcgaacttgaaaggactgcaattagacttatgcgaaacgttgacatatca
cccgaaaaatcagcggatactattataatagatactgaaacaacaggactcagtgaatta
gacgatgaattgctgcaagtatctatcatcgatgatgcaggaaatgttctttacaacagc
tatcttcgccccttataccatacttcatggaaagaagcggaatgtgtaaataacattact
ccgcgaatggtagcggaggcaccgaccatctatgatgaaatgccaaagataaatgctatc
ataaaagctgccaaaaaaatcataggctttaataccgggtttgatgaaaacttcctttat
ttctccggtggaatttcatggatgaataaagaggtcgttgatgtaatgacgatgttcgcg
ccgatctacggtgaatggagcgaacaatacgacgattataaatggcaaaaccttattaaa
gctgccgattactatgattatgattggagcagccgaccaggtgaagcacacaacagtctt
gcagactgctatgctaccctatatgtgtacaataagatcattgaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (93)   
   KEGG ORTHOLOGY (1)   
   RefGene (90)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (104)   

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