KEGG   Rickettsia amblyommatis GAT-30V: MCE_04730
Entry
MCE_04730         CDS       T01787                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
ram  Rickettsia amblyommatis GAT-30V
Pathway
ram03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ram00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MCE_04730 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ram03021]
    MCE_04730 (rpoZ)
   03400 DNA repair and recombination proteins [BR:ram03400]
    MCE_04730 (rpoZ)
Enzymes [BR:ram01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MCE_04730 (rpoZ)
Transcription machinery [BR:ram03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     MCE_04730 (rpoZ)
DNA repair and recombination proteins [BR:ram03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      MCE_04730 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AFC69829
UniProt: H8K5N5
Position
821357..821740
AA seq 127 aa
MARITAEDCNKIIPDRFRLVVLATRYAKLLNYQVETNQIKKEKRDKPPVIALRRIAAGKV
SVAQLEQDLINSLRTRTMIEPLVNQDESEDVEEKFEYLPEVYIGEDYSDLDDQILIDENG
EDCETDK
NT seq 384 nt   +upstreamnt  +downstreamnt
atggcaagaattacagcagaagattgtaataaaattataccggataggtttcggcttgtt
gtcctagcaacaaggtatgctaaattattaaattatcaagtagaaactaatcaaatcaaa
aaagaaaagcgtgataagcctcctgttatcgcattacgtagaattgctgccggaaaagta
tcggtagctcagttagaacaagatttaataaatagtctgcgtacaagaactatgatagag
ccgcttgttaatcaagatgaatcagaagatgtagaagaaaaatttgagtatttacctgaa
gtttatatcggggaagattattctgatttagatgatcaaatccttattgatgagaatggc
gaagattgtgaaactgataagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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