KEGG   Raoultella sp. X13: DSD31_25910
Entry
DSD31_25910       CDS       T05540                                 
Name
(GenBank) type III restriction-modification system endonuclease
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
rao  Raoultella sp. X13
Brite
KEGG Orthology (KO) [BR:rao00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rao02048]
    DSD31_25910
Enzymes [BR:rao01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     DSD31_25910
Prokaryotic defense system [BR:rao02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   DSD31_25910
SSDB
Motif
Pfam: RE_endonuc ResIII DEAD
Other DBs
NCBI-ProteinID: AXC32859
UniProt: A0A808XYD1
Position
unnamed:complement(7885..10797)
AA seq 970 aa
MSKGFTFEKNLPHQKAGVDAVMNVFVSAVPHQTDNVAIRLLSNPELNLSEQQYYNNIKNV
QEFNGIEHSKDNYDAKSNVIDVSMETGTGKTYTYTKTIFDLNKYFGINKFIIIVPTLSIK
AGTVNFLKSDALKEHFRDDYERELKTYVVESQKSSGKNTKSYMPQAIHDFVEASNFNKKY
IHVLVINSGMINSKSLTDSYDVGLLDNQFDTPFAALSAVKPFIIIDEPHKFPTGKKTWEN
IEKFNAQYIVRYGATFSEGYKNLVYRLTAVDAFNEDLVKGIDAYIEDMIGDGNASLRFVQ
SDGKEATFELNENGNKKKFKLAKDESLSKTHSAIHDLTLDALNKSTAVLSNGIELKIGSS
INPYSYDQTLADNMMLKAVKEHFKLEKEYLTQRPRIKPLTLFFIDDIEGYRDGNDIAGSL
KTKFEAFILAEANELLKTEKDEFYRNYLEKTVKDVSSVHGGYFSKDNSDKDDKIEQEINE
ILHDKERLLSLDNPRRFIFSKWTLREGWDNPNVFQICKLRSSGSTTSKLQEVGRGLRLPV
NEYMCRVKDRNFTLNYYVDFTEKDFVDSLVKEVNNSSFKETVPSKFTEELKVKILTKYPE
LSSRTLMNEVFDDEIIDDNDNFKDSDSYTRLKGKYPAAFPTGVKPSKIKKATDGKKRTKM
RVGKFSELKDLWDLINQKAVIEYKINSENEFLSIFKSFMLEESDRFTKSGVHTRIDKIYI
RDNTAMSKSIISDDDNFAKLNTMSYREFLDNLSQTIFAKHDTLHKVFCDIKDTINITDYL
NIQTIRKIKSGFSKYLLNNSFNKFSLGYNVISGSIHPTKFTNADGNPLSEVLSSDLGVLQ
DYTKSPLDSYLFEEVFYDSELERLNITDKEILSVAVFTKIPKNSIKIPVAGGYTYSPDFA
YVVKTTSGDYLNFIIETKNVDGKDSLRLEEQRKIEHAQALFNQISKTFKVEFMTQFANDE
IYDLIKKTQA
NT seq 2913 nt   +upstreamnt  +downstreamnt
atgtctaaagggttcacattcgaaaagaatttacctcatcaaaaggctggcgttgatgcg
gtgatgaatgtctttgtatctgccgtacctcatcagacggataatgttgctattcgcctg
ttatctaatccagaactgaatctgtctgaacagcaatactacaacaacataaaaaatgtt
caggagttcaatggtattgagcattcaaaagataattacgatgctaaaagcaacgtcatt
gacgtttctatggagacagggacgggtaaaacctatacctacacaaaaaccatttttgat
ctgaacaaatattttggcattaataaatttattattattgttcctaccctatcgataaag
gccgggacagttaactttttaaaaagtgatgctttaaaagagcattttagagatgattac
gagcgtgaactaaagacttatgttgttgaaagtcaaaaaagctctggaaaaaacacaaaa
tcgtatatgcctcaagctatccatgattttgttgaagcaagtaattttaacaagaaatat
atacacgtccttgtaatcaactcagggatgattaactccaagtctttaactgactcttat
gatgttggtttgcttgataatcagtttgatacgccatttgctgctcttagtgcggtaaaa
ccattcattatcattgatgagcctcataaattccctacgggtaaaaagacatgggaaaat
attgagaaatttaatgctcaatatattgttcgttatggcgcaacctttagcgagggctat
aaaaacttagtttatcgtctgacagccgtggacgcattcaatgaagatctagttaaaggt
attgatgcttacattgaagatatgattggtgatggtaatgccagcctcagatttgttcaa
tctgatgggaaagaagccacttttgaactgaatgaaaatggcaacaaaaaaaaattcaaa
ttagcaaaagatgaatcactatctaaaacacatagtgcaattcatgatttaacgctggat
gccttgaacaagagcacggcagtgttgagtaatggtattgaactaaaaattggtagttca
ataaacccttactcttacgatcagacgctcgctgataacatgatgcttaaagcagtcaaa
gaacattttaagttagaaaaagagtatctgacacaaagaccacgtataaagcctcttact
ctattcttcattgatgacattgaagggtatcgtgatggtaatgatattgccggaagcctg
aaaactaagtttgaagcgttcattttggcagaagcgaatgaactgttaaaaacagaaaaa
gatgagttttacagaaactaccttgaaaaaactgttaaggatgtatcttctgttcatggt
ggttatttttcaaaagataatagtgataaggatgataaaattgaacaggaaatcaacgaa
atccttcatgacaaagagcgtttattatctttagataatcctcgccgtttcattttctct
aagtggacattgagggaaggctgggataaccctaacgtattccagatttgtaagctacgt
tcgagcggtagcaccacatctaaacttcaagaagtagggcgtgggttgcgtcttccagtg
aatgaatacatgtgtcgagtgaaagatcgcaattttacactcaactactatgttgatttt
acggaaaaggattttgtcgattctcttgtcaaagaggtcaacaatagctccttcaaagaa
actgttccaagtaagtttactgaagagcttaaggttaaaatcctaactaagtatcctgag
ctttcatccagaacgctcatgaatgaagtttttgatgatgaaatcattgatgacaatgac
aacttcaaagattctgattcctatacacgcttaaaaggtaaatacccggcagcattccct
actggagtaaaaccaagcaaaattaaaaaagctaccgatggaaaaaaacgcactaaaatg
cgtgttggcaagttcagtgaacttaaagatttgtgggatttgataaatcagaaagctgtg
attgagtataagataaacagcgagaatgaattcttatccatattcaaatcatttatgctc
gaagaatcagatagatttactaaatcaggcgttcacacacgcattgataaaatttacatt
cgtgataatacagcaatgtcgaaaagtatcattagtgatgatgataactttgctaaactc
aatacaatgagctatcgagagtttcttgataacttatcacaaactatttttgctaaacac
gatactttgcataaggtgttttgtgatataaaagatactatcaatatcactgactacctg
aacattcaaactatcagaaagattaaatctggctttagcaagtatttgttgaacaattcg
tttaataagttcagtcttggctacaatgtgatatcaggctctattcatcctacaaaattc
actaatgcagatggtaatcctctaagtgaggtattatcaagtgatcttggtgtattgcag
gattatacaaaatcaccattggattcatatctttttgaagaggtcttttatgactcagag
ctggaaagacttaacataacagataaagagatcctgtctgtagctgtttttacgaagata
ccgaagaactctattaaaattccggtggcaggaggatacacgtattcccctgactttgct
tatgttgttaaaactacaagtggtgattacttaaactttatcattgaaacaaaaaatgtt
gatggtaaagatagcttacgccttgaagaacaacgaaaaattgaacatgctcaggcattg
tttaatcaaataagcaaaacattcaaagttgaattcatgactcaatttgctaatgatgag
atttatgatttaataaagaaaacacaagcttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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