KEGG   Rickettsia australis: MC5_06230
Entry
MC5_06230         CDS       T01783                                 
Name
(GenBank) ribonuclease E
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
rau  Rickettsia australis
Pathway
rau03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rau00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MC5_06230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rau03019]
    MC5_06230
   03009 Ribosome biogenesis [BR:rau03009]
    MC5_06230
Enzymes [BR:rau01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     MC5_06230
Messenger RNA biogenesis [BR:rau03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MC5_06230
Ribosome biogenesis [BR:rau03009]
 Prokaryotic type
  rRNA processing factors
   MC5_06230
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1
Other DBs
NCBI-ProteinID: AFC71492
UniProt: H8K899
Position
complement(1100290..1102362)
AA seq 690 aa
MNKKIIIDANFPSETRVVLLGQSNNIEDIEFQTTVRQQNKGNIYLAKVTRIEPSLQAVFI
EYGMDKSGFLPFSEIHPNYYNLPTSERNFPVNAFPEIALSNITVEDDKEKPVAIYDSLVD
SEEIDLKTIEDLVESKFQSELNLEAADDIEIIQSGTTESNIPQYKQYKVQEVIRKNQILL
VQVTKEERGNKCAAFTTYISLAGKYCVLMPNKGSQNGISRKISNGEERKRLKDILNKIVS
GDKNTYSVIVRTAGRGSSTLDLKKDYNYLARLWNKIRKSTIKFPAPCFIHEEDSIIRKTI
RDMCDHNVKEVVIQGQEAYEDASRFMQDLLPSELAKLKEHKNKTPIFTKFQVEEQLVKLY
QPVVTLPSGGYIVINPTEALISIDVNSGKSTSENNIEETALKTNLEAAKEVAKQVKLRDL
SGLIVVDFIDMSEAKNRKIIERSFKEFLSRDRARIQTGNISQFGLLEFSRQRLRSSFLET
NSAICSHCNGKGVIRASDANAMLILRTIENEIFEERIDVINVFTNIVSVIYLLNNKRAEI
KFIEEKYNIQLNFYSDPNATSDSYSIEKVKLLKKNNNNVNPVKPVIQNHSADYTEEEPQK
EQLRKNKHKWKTANHSNNIANEVKDKSLEAKEPVEQTVSAVEEVKVVESNAGLEEAQAAP
KKTKRRYRNKKSNKKRPANTAEDTEKNVES
NT seq 2073 nt   +upstreamnt  +downstreamnt
atgaataaaaagattataattgatgctaattttccaagtgaaacaagagtagttttatta
ggacaaagcaacaatatagaagatattgaatttcaaacaactgtaagacaacaaaacaaa
ggtaatatttatttagcaaaagttacaagaatagaaccgtcgttacaagctgtttttata
gagtatggaatggataaaagcggttttttaccgtttagtgaaatccatcctaactattac
aatttgcctacctcggagagaaattttccggttaatgcttttcctgaaatagctctttcg
aatattacggttgaggatgataaagagaaaccggttgctatatatgattctttggttgat
agtgaagaaattgacctaaaaactatagaagatttagtagagagtaaattccagtcagaa
cttaatttagaagcggctgatgatattgaaattattcaaagcggtaccactgagtcaaat
attccgcaatataaacaatataaagttcaagaagtaataagaaaaaaccaaatattatta
gtacaggttactaaggaagaacgaggaaataagtgtgccgcttttactacgtatatatct
ttagccggcaaatattgtgttttaatgcctaataaaggttcgcaaaacggcatatcacgt
aaaatatcaaacggggaagaaagaaaaagactgaaagatattttaaataaaatagtaagt
ggtgacaaaaatacttatagcgtaattgttagaactgcaggtagaggaagtagtacctta
gatttgaagaaagactataattatttagcaagattatggaataaaattcgtaaaagtact
attaaatttccagctccgtgttttatccatgaagaagatagtataatacgtaaaaccata
cgtgatatgtgtgatcacaatgttaaagaagtagtgattcaaggacaggaagcctatgag
gatgcttcaagatttatgcaggatttattaccttcagagcttgcaaagctgaaagagcat
aaaaataaaactcctatatttactaagtttcaagtagaagagcaattagttaaattatat
cagcctgtcgtgacactaccttcagggggatatatcgttattaatcctacggaagctctt
atttcaattgatgtaaattccggtaaatcaacttctgaaaacaatatcgaagaaacggca
ctaaaaactaatttagaagcagcaaaagaagtagcaaagcaagtaaagcttagagatcta
tcaggtttgatagttgttgattttatagacatgagcgaagctaagaatcgtaaaatcatt
gaacgatcctttaaagagtttttaagtcgtgatcgtgctcgtatacaaaccggtaatatt
agtcagtttggactccttgaattctcaaggcagcgattacgttcttctttcttagaaact
aattcggctatttgttctcattgtaacggtaaaggagtcattagggcgagtgatgctaat
gctatgttaattttacgtactatagagaatgaaatttttgaagaaagaattgatgtaata
aatgtttttaccaatatcgtttcagttatttatctacttaataataaacgcgctgagata
aaatttattgaagaaaaatataatatacagcttaatttttattctgatcctaatgctaca
tcagatagttattcaattgaaaaagtgaagctgttgaagaaaaacaacaataacgttaat
cctgttaagccggtgattcagaatcatagtgctgattatactgaagaagagccgcaaaaa
gaacagttacgaaaaaataaacataaatggaagacagctaatcatagtaataatattgct
aatgaagtaaaagataagagtttagaggcaaaagaaccggtagagcaaactgtaagtgct
gtggaagaggtgaaagttgtagaaagtaatgccggtttagaagaagcacaagctgctcca
aaaaagacaaaacgtagatatcgtaataaaaaatcaaataaaaaacgtcctgctaatacc
gccgaagatacggaaaagaatgtagagtcttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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