KEGG   Rhodococcus aetherivorans: AAT18_10160
Entry
AAT18_10160       CDS       T03876                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
rav  Rhodococcus aetherivorans
Pathway
rav03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rav00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AAT18_10160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rav03021]
    AAT18_10160
   03019 Messenger RNA biogenesis [BR:rav03019]
    AAT18_10160
Transcription machinery [BR:rav03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     AAT18_10160
Messenger RNA biogenesis [BR:rav03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     AAT18_10160
SSDB
Motif
Pfam: ATP-synt_ab Rho_RNA_bind Rho_N Spore_III_AA AAA_25 NACHT VWA_2 AAA_22
Other DBs
NCBI-ProteinID: AKE89537
Position
2195090..2196955
AA seq 621 aa
MVLAELRTLAAELGIKGTSGMRKGDLIAAIKERQGGGAAETAPAPEQPARPVRARRARGA
AQDAAPADTAAPAAEPAQARPAATTAPEQPAEAAEQPADGEAEGGRRGRQRRGRRGGDQA
AETTTAEAPKDAAEARTDEKPRAEEKTEEKAEPSDGGRRERGQRDGQRDQRDGQRDQRDQ
GERRREDRGQGPRQDGRDGRGGEDDEDGRGRRGRRFRERRRGRDRGEAGGDTREPEIRED
DVLQPVAGILDVLDNYAFVRTSGYLAGPNDVYVSMNMVRKNGLRRGDAITGAVRVPREGE
QGNQRQKFNPLVRLDTVNGGDVEAAKRRPEFNKLTPLYPNQRLRLETTPNILTTRVIDLI
MPIGKGQRALIVSPPKAGKTTVMQDIANAITTNNPECYLMVVLVDERPEEVTDMQRSVKG
EVIASTFDRPPSDHTSVAELAIERAKRLVEQGRDVVVLLDSITRLGRAYNNSSPASGRIL
SGGVDSTALYPPKRFLGAARNIENGGSLTIIATAMVETGSTGDTVIFEEFKGTGNAELKL
DRKIAERRVFPAVDVNPSGTRKDELLMSPDEFAVVHKLRRVLSGLDSHQAIDLLIDRLKK
SKSNIEFLLQVSKTAPGALDD
NT seq 1866 nt   +upstreamnt  +downstreamnt
atggtgctggccgagctgcggactctcgcggccgaactcggcatcaagggaacctccggg
atgcgcaagggcgatctcatcgccgcgatcaaggagcgtcagggcggcggagccgccgag
acggctcctgcgccggaacagccggcccggcccgtccgggctcgtcgcgcccgtggtgcc
gcccaggacgcggccccggccgacaccgccgcccccgccgccgagccggcccaggcgcgg
cccgccgcgacgacggcgcccgagcagcccgccgaggcggcggagcagcccgccgacggc
gaggccgagggtggccgccggggtcgtcagcgtcgcggtcgccgaggtggcgaccaggcc
gccgagacgaccaccgccgaggccccgaaggacgccgccgaggcgcggaccgacgagaag
ccgcgcgccgaggagaagaccgaggagaaggccgagccgtccgacggcggtcggcgcgag
cgcggtcagcgcgacggccagcgcgaccagcgcgacggccagcgcgaccagcgcgaccag
ggggaacgccgccgcgaggaccgtggtcagggcccccgtcaggacggccgcgacggccgg
ggtggcgaggacgacgaggacggccgcgggcgccgcgggcgccgcttccgtgagcgtcgt
cgcggacgtgaccgcggcgaggccggcggtgacacacgcgagcccgagatccgcgaggac
gacgtcctgcagccggtcgccggcatcctcgacgtcctggacaactacgcgttcgtccgg
acctccgggtacctggccggccccaacgacgtgtacgtctcgatgaacatggtgcgcaag
aacggcctgcgccggggcgacgccatcaccggtgcggtccgcgtgccgcgcgagggggag
cagggcaaccagcgccagaagttcaacccgctggtccggctcgacacggtcaacggcggc
gacgtcgaggccgccaagcgccgcccggagttcaacaagctcaccccgctgtacccgaac
cagcggctgcggctcgagaccaccccgaacatcctgaccacccgcgtgatcgacctgatc
atgccgatcggcaagggccagcgtgccctgatcgtctcgccgcctaaggccggcaagacg
acggtgatgcaggacatcgcgaacgcgatcacgaccaacaaccccgagtgctacctcatg
gtcgtgctggtggacgagcggcccgaagaggtcaccgacatgcagcgctcggtcaagggc
gaggtcatcgcctcgaccttcgaccggccgccgtcggaccacacgtcggtcgccgagctt
gcgatcgagcgggccaagcggctcgtcgagcagggccgcgacgtggtcgtcctgctcgac
tcgatcacgcgcctcggccgcgcgtacaacaactcgtcgccggcgtcgggccgcatcctc
tccggtggtgtcgactcgaccgccctgtacccgccgaagcggttcctgggcgcggctcgc
aacatcgagaacggcggctcgctcaccatcatcgccacggccatggtggagacgggttcg
acgggcgacacggtgatcttcgaggagttcaagggcaccggcaacgccgagctcaagctc
gaccgcaagatcgccgagcggcgcgtgttcccggcggtggacgtcaacccctccggtacg
cgcaaggacgagttgctgatgagccccgacgagttcgcggtggtgcacaaactgcgccgc
gtgctctccggtctggactcgcaccaggccatcgatctgctcatcgaccggctcaagaag
agcaagagcaacatcgagttcctcctgcaggtgtcgaagacggcaccgggagcgctcgac
gactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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