KEGG   Rousettus aegyptiacus (Egyptian rousette): 107499786
Entry
107499786         CDS       T06036                                 
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
  KO
K10754  replication factor C subunit 1
Organism
ray  Rousettus aegyptiacus (Egyptian rousette)
Pathway
ray03030  DNA replication
ray03410  Base excision repair
ray03420  Nucleotide excision repair
ray03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ray00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107499786 (RFC1)
   03410 Base excision repair
    107499786 (RFC1)
   03420 Nucleotide excision repair
    107499786 (RFC1)
   03430 Mismatch repair
    107499786 (RFC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ray03032]
    107499786 (RFC1)
   03400 DNA repair and recombination proteins [BR:ray03400]
    107499786 (RFC1)
DNA replication proteins [BR:ray03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    107499786 (RFC1)
DNA repair and recombination proteins [BR:ray03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     107499786 (RFC1)
SSDB
Motif
Pfam: RFC1 BRCT AAA PTCB-BRCT AAA_22 BRCT_2 AAA_14 RuvB_N AAA_5 AAA_30 Rad17 AAA_7 AAA_16 AAA_18 AAA_17 nSTAND3 AAA_33 RNA_helicase NTPase_1 AAA_19 TIP49
Other DBs
NCBI-GeneID: 107499786
NCBI-ProteinID: XP_015979767
Position
Unknown
AA seq 1146 aa
MDIRKFFGVIPSDKKPVSETVKKNEKTKSAEETFKTKKGIKEIKVNSSCKEDDSKQKQPN
KKKRVIYDSDSESEETVQVKNAKKEPEKLSLSPKPSKIIRNDPVTYISETDDEDDFVCKK
AASKSKENGGSTNSYLGATNMKKNEENIKTKNKPLSPIKLTPTSVLDYFGTGSVQRSDKK
MVASKRKEPSQNADDSRLNDETIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKNKK
AHKDQEERETFSSVQANLHKTEKHKSPYKVKTEQFLDKRKNYSPKKQTKCESSKESQQHS
KSSPYKIRKTSPKASSKLTLLKNKEESSSKETEPMSSKRKENAIELKETKTPKKTKSSPA
KKESVSPEDSEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLIFVITGVLESIE
RDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLDLIRTM
PGKKSKYEIAVEAEMNKGKSKLQRTPQKNEQGKRKISPTKKESESKKSRLTPKRGSSLNS
VMKETSVFQRGLDFKEQEAEETSGNSWARNWADDSSENKVENLLWVDKYKPTSLKTIIGQ
QGDQSCANKLLRWLQNWHKRPSEDKKHAKFGKFAGKDDGSSFKAALLSGPPGVGKTTTAS
LVCQELGYSYVELNASDTRSKNSLKEIVAESLNNTSIRGFYSSGAAHSVSMKHALIMDEV
DGMAGTEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKG
AMMSIAFKEGLRIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKK
DIKLGPFDVARKVFATGEETAHMSLVDKSDLFFHDYSIAPLFVQENYLHVKPVAAGGDMK
KHLMLLSRAADSICDGDLVDRQIRSRQNWSLLPTQAIYASVLPGELMRGYMTQFPTFPSW
LGKHSSTGKHDRIVQDLALHMSLRTYSSKRTINMDYLSHIRDVLVQPLISQGVEGVQDVV
ALMDAYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEIHLTPYSLQAVKT
SRQSTGPALDSEYNEELNEDDSQSDEKDQDSTETDAMIKKKTKSSKSSKSEKDKESRKGK
GKSSKK
NT seq 3441 nt   +upstreamnt  +downstreamnt
atggatattcggaaattctttggggttatcccaagtgacaagaaacctgtgagtgaaaca
gtaaagaagaatgagaaaacaaagtctgctgaagaaacattcaaaacaaagaaaggaata
aaggaaatcaaggtaaatagttcttgtaaagaagatgactctaaacagaagcaaccaaac
aagaaaaagagggtcatctatgattcagattcagaatcagaggagacagtgcaggtaaaa
aatgccaaaaaggaaccagaaaaattgtcattgtctcctaaacctagtaaaattatacgg
aatgatcctgttacatacatttcagaaacagatgatgaagatgacttcgtgtgtaagaag
gcagcctctaagtcaaaagagaatggaggatctacaaatagttaccttggagcaacaaac
atgaaaaagaatgaagaaaacattaagaccaagaataagcctctttcaccaataaaactt
acccccacatcagtgcttgattattttggaactggaagtgtccaaagatcagataagaag
atggtggcaagcaaaagaaaagagccttcacaaaatgcagatgattccaggttaaatgat
gaaactatcgccaagcaattgcaacttgatgaagatgcagagctggagagacaattgcat
gaagatgaagagtttgctagaacattagccatgttggatgaagaacctaagaacaaaaag
gctcacaaggaccaagaagagagagaaacgttttcatctgtccaagccaatttacataaa
acagaaaaacataaatctccttataaagtgaaaacagaacaatttctggataaaaggaag
aactacagtcctaagaagcaaactaaatgtgaaagctcaaaagaatctcagcagcattcc
aagtcatcaccttacaaaataagaaaaacttctcctaaagctagttccaagctgacgctt
ttgaaaaacaaagaagagagttcttctaaagaaacagagcctatgtcctcaaaaagaaaa
gaaaatgccattgaattgaaagagacaaaaactcctaagaagaccaaaagttctccagct
aaaaaagagtctgtaagtcctgaagattctgaaaaaagacgcactaattatcaagcttat
cgaagttacttaaatcgagaaggtcccaaagctctgggttccaaagaaattccaaaggga
gctgaaaattgcttggaaggccttatatttgtaatcacaggagtgctggagtccattgaa
agagatgaagccaagtctttaattgaacgttatggaggaaaagtaactggaaatgtcagc
aagaaaacaaactaccttgtcatgggtcgtgatagcggacagtccaagagtgataaggca
gcagctttggggacaaaaattattgatgaagatggcctattggatctgattcgaactatg
ccaggcaagaagtccaaatatgaaatagcagttgaagctgagatgaataaaggaaagtcc
aaattgcaaagaacaccacaaaaaaatgaacaaggaaaaaggaaaattagtccaaccaag
aaggagtcagaatccaaaaagagcagactgactcccaaaaggggcagctctctaaattca
gtaatgaaggaaacaagtgtgtttcagagaggcctggacttcaaggaacaggaggctgag
gagacaagtggtaacagctgggctaggaattgggctgatgacagcagtgaaaacaaagtg
gaaaatttgctctgggtcgataaatataagccaacctcgctcaagaccataattggacag
caaggtgaccagagctgtgccaacaaactcctacgctggctgcaaaactggcacaagaga
ccatctgaagataaaaaacacgcaaagtttggtaaatttgctggcaaagatgatggttct
agttttaaagcagcattgctctcaggccctccaggtgttggcaaaacaaccacagcctct
ctggtctgtcaggaattgggatatagctacgtggaactgaatgcaagtgatactcggagt
aagaacagtttgaaggagattgttgctgaatcacttaataataccagcatcagaggcttt
tattcaagtggagcagcccattcagtaagcatgaaacacgctctcatcatggatgaggtg
gatggcatggcgggcacggaagacaggggaggcattcaggaattaattggcctgataaaa
catacaaaaattcccattatttgtatgtgcaacgatagaaatcatcccaagattcgctct
ttggttcattattgttttgaccttcgttttcaaagacctcgggttgaacagataaagggt
gctatgatgtctattgcatttaaagagggtttaaggattcctcctccagctatgaatgaa
ataattttgggagccaatcaagatatcagacaggttttacacaatctgagtatgtggtgt
gcacgaagtaaggcgctaacctatgaccaggccaaggctgattctcatagagccaaaaag
gatatcaaactgggcccatttgatgtagcccggaaagtgtttgcaactggagaggagact
gctcacatgtcgcttgtggacaaatcagatctcttttttcatgattattcaatagcaccc
ctctttgtccaggagaactacttgcatgtgaagcctgtagctgcagggggtgacatgaaa
aagcacttgatgcttttaagcagagcagcagatagcatatgcgacggtgacctagtggac
cgtcagatccggagtaggcaaaactggagtcttctgcccacccaggccatttatgccagt
gttcttccaggagagttaatgaggggttacatgacccagtttcccaccttcccgagctgg
ttgggtaagcattcatctacaggtaaacacgatcggattgttcaggacctggcattgcat
atgagtctcagaacttactccagcaaaaggactatcaatatggattatctgtcacatata
agggatgtacttgtacagcccttgatctcacaaggggtagaaggagtacaggatgttgtt
gctcttatggacgcatattacttgatgaaagaagactttgagaatatcatggaaattagc
agctggggaggcaaacctagccccttctccaagctggatcccaaggtgaaagcagccttt
acaagagcttacaataaggaaatccaccttactccatattcacttcaggcagtaaagaca
tcaagacagagcacaggcccagcactggattctgaatataacgaagagttaaatgaagat
gactctcaatctgatgagaaggatcaagatagtacggaaactgatgctatgatcaagaaa
aagacaaaatcttcaaagtcttcaaaatcagagaaagataaggagtccagaaaaggaaaa
ggaaaaagttcaaagaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (21)   
   Pfam (21)   
All databases (34)   

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