KEGG   Rhinopithecus bieti (black snub-nosed monkey): 108540425
Entry
108540425         CDS       T04641                                 
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
rbb  Rhinopithecus bieti (black snub-nosed monkey)
Pathway
rbb03082  ATP-dependent chromatin remodeling
rbb03250  Viral life cycle - HIV-1
rbb04714  Thermogenesis
rbb05225  Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:rbb00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    108540425 (SMARCB1)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    108540425 (SMARCB1)
 09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    108540425 (SMARCB1)
 09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    108540425 (SMARCB1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rbb01009]
    108540425 (SMARCB1)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rbb03021]
    108540425 (SMARCB1)
   03036 Chromosome and associated proteins [BR:rbb03036]
    108540425 (SMARCB1)
Protein phosphatases and associated proteins [BR:rbb01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108540425 (SMARCB1)
Transcription machinery [BR:rbb03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     108540425 (SMARCB1)
    SWI/SNF complex
     108540425 (SMARCB1)
Chromosome and associated proteins [BR:rbb03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    108540425 (SMARCB1)
   PBAF complex
    108540425 (SMARCB1)
   SWI/SNF complex
    108540425 (SMARCB1)
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd DUF1679
Other DBs
NCBI-GeneID: 108540425
NCBI-ProteinID: XP_017744982
UniProt: A0A2K6KAA0
Position
Unknown
AA seq 385 aa
MMMMALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYL
REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA
SQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASA
IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE
LGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE
MEKKIRDQDRNTRRMRRLANTAPAW
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgatgatgatggcgctgagcaagaccttcgggcagaagcccgtgaagttccagctggag
gacgacggcgagttctacatgatcggctccgaggtgggaaactacctccgtatgttccga
ggttctctgtacaagagatacccctcactctggaggcgactagccactgtggaagagagg
aagaaaatagttgcatcgtcacatggtaaaaaaacaaaacctaacactaaggatcatgga
tacacgactctagccaccagtgtgaccctgttaaaagcctcggaagtggaagagattctg
gacggcaacgatgagaagtacaaggctgtgtccatcagcacagagccccccacctacctc
agggaacagaaggccaagaggaacagccagtgggtacccaccctgcccaacagctcccac
cacctggatgccgtgccgtgctccacgaccatcaacaggaaccgcatgggccgggacaag
aagagaaccttccccctttgttttgatgaccatgacccagctgtgatccacgagaacgca
tctcagcccgaggtgctggtccccatccggctggacatggagatcgatgggcagaaactg
cgagacgccttcacctggaacatgaatgagaagttgatgacacctgagatgttttcagaa
atcctctgtgacgatctggatttgaacccgctgacgtttgtgccagctatcgcctccgcc
atcagacagcagatcgagtcctaccccacggacagcatcctggaggaccagtcagaccag
cgcgtcatcatcaagctgaacatccatgtgggaaacatttccctggtggaccagtttgaa
tgggacatgtcagagaaggagaactcaccagagaagtttgccctgaagctgtgctcagag
ctggggttgggcggggagtttgtcaccaccatcgcatacagcatccggggacagctgagc
tggcatcagaagacctacgccttcagtgagaaccctctgcccacagtggagattgccatc
cggaacacgggcgatgcggaccagtggtgcccgctgctggagacgctgacagacgccgag
atggagaagaagatccgcgaccaggacaggaacacgaggcggatgaggcgtctcgccaac
acagccccagcctggtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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