KEGG   Mucinivorans hirudinis: BN938_1336
Entry
BN938_1336        CDS       T03205                                 
Name
(GenBank) Penicillin-binding protein 2 (PBP-2)
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
rbc  Mucinivorans hirudinis
Pathway
rbc00550  Peptidoglycan biosynthesis
rbc01100  Metabolic pathways
rbc01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:rbc00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    BN938_1336
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    BN938_1336
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rbc01011]
    BN938_1336
Enzymes [BR:rbc01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     BN938_1336
Peptidoglycan biosynthesis and degradation proteins [BR:rbc01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   BN938_1336
SSDB
Motif
Pfam: Transpeptidase PBP_dimer
Other DBs
NCBI-ProteinID: CDN31424
UniProt: A0A060RD18
Position
complement(1327551..1329377)
AA seq 608 aa
MESRGKILIIAVVVLCLIIVVRLFYIQVLDSSYKIFANNNALRYQIQFPPRGEVYDRNGE
FLVQSKEAYDLLCIPREVTPFDTVRFASIIGVEVADVRAEIQKARKYSTRRPSVLFKQLS
KEVKLRLEERRFRGFFTQYRTVRTYPTKMAGNLLGYVGEVDDRDMSRDPYYKMGDFIGKT
GIEKAYEEQLRGIKGVKVELVDVHGMPKGAYQDGVYDTLAQPGRAIYSTIDGKLQQLAEE
LLQGKVGAVVAIEPATGEILVMANSPSYDPDLLVGRDRSKNYARMVFDLRQPLYNRAVMS
SYPPGSTFKTVNGLIGMQLGVATENDLHSCPGGYPMGGVIRPKCHAHYSPLNMSGAVANS
CNAYFAYVFRDILDRGKVAPTFRERYDIWREYVMSFGFGRKLGSDFTGERNGNVPSADYY
NRIYNNRWNSYTVISLSIGQGEMGCTPLQMANMAAIIANRGYYYIPHVVKRVEGQDTIHS
RFTEKHYTKVAPEHFNSVVEGMYQAVNVAGTATIARVAGLDICGKTGTAQNPQGADHSVF
MSFAPRDNPKIAIYVFIEHGRFGATTAAPIASLLAEQYLTDTIKRPDMVEYVKNMQVHYP
MYDRVGAR
NT seq 1827 nt   +upstreamnt  +downstreamnt
atggaaagtcgtggaaagatattgattattgcggtggtagtgttatgcttgattatcgtg
gtgaggctgttttatatacaggtactggatagtagctacaagatttttgccaataataac
gcacttcgttaccaaattcagtttccgccgcggggtgaggtctacgaccgcaatggcgaa
tttttggtgcagagtaaggaggcgtacgatttgttgtgtatcccgcgtgaggtcacacct
ttcgacacggttaggtttgcctcaatcatcggggtcgaggtcgcagacgtgcgtgccgag
attcaaaaggcacgtaaatactccactcgccgcccttcggtgctattcaaacagctttcc
aaggaggtgaagctcaggttagaggagcgtcgctttagaggattctttacacaatatcgc
accgtgagaacctatcccacaaagatggcgggcaacctgctgggctatgtgggcgaggtg
gacgatagagatatgagccgcgacccatattacaagatgggcgacttcatcggcaagacg
ggtatagagaaagcatatgaggagcaactacgtggcataaagggtgttaaggtggagctt
gttgatgttcacggtatgcccaagggggcatatcaagatggagtttacgacactctggcg
cagcctggcagggcgatatattcgaccatagacggcaaattgcagcaacttgccgaggag
cttttgcaggggaaagtgggagctgttgtggcgattgagcctgctacgggggagattctt
gttatggcaaattcgccgagttatgaccccgatttgcttgttgggcgcgaccgctccaag
aactacgcgcggatggttttcgacctgcgccaaccgctctacaaccgtgccgtgatgtcc
tcctatccgcccggatcgaccttcaagaccgtcaatggactcatcgggatgcaacttggc
gtagccacagagaacgacctgcactcctgccccgggggctacccaatgggtggtgtaatc
cgtcctaagtgccacgcccactactcccccttgaatatgtcgggggcggtggcaaactcc
tgcaatgcttactttgcttatgtttttcgcgatattctcgaccgagggaaggttgctcca
acatttcgcgagcgatacgatatttggcgcgaatatgtgatgagcttcggttttggacgc
aaactcggttcggattttaccggtgagcgcaatggcaacgtcccctcggctgactactac
aatcgaatatacaacaaccgttggaactcttataccgttatttcgctatccatcggacag
ggtgagatgggttgcacaccgttgcaaatggctaatatggctgcaattatagccaatcgt
ggctactactatattcctcacgtggtcaagagagtcgaggggcaggatactatacacagc
cgatttaccgaaaaacactacaccaaggttgcacccgaacactttaattcggtggtagag
ggtatgtatcaagccgtcaatgtggcaggcactgctacgattgcccgcgttgcggggtta
gatatatgtggcaagaccggtactgcgcaaaatccgcaaggtgctgaccattcggtattt
atgagttttgcgccgcgggataaccccaaaattgccatatatgtctttattgagcacgga
cgtttcggtgccacgactgctgcaccgatagcttctctccttgccgaacaatacttaact
gataccattaaacgccccgatatggtggagtatgtcaaaaatatgcaggttcactatccg
atgtacgatagggttggcgcgagatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (31)   

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