KEGG   Aerosticca soli: ALSL_2042
Entry
ALSL_2042         CDS       T06043                                 
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
rbd  Aerosticca soli
Pathway
rbd03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:rbd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    ALSL_2042
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rbd03021]
    ALSL_2042
   03400 DNA repair and recombination proteins [BR:rbd03400]
    ALSL_2042
Enzymes [BR:rbd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     ALSL_2042
Transcription machinery [BR:rbd03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     ALSL_2042
DNA repair and recombination proteins [BR:rbd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      ALSL_2042
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RPOC_hybrid Apocytochr_F_C Biotin_lipoyl RnfC_N
Other DBs
NCBI-ProteinID: BBD80677
UniProt: A0A2Z6E6M2
Position
complement(2152613..2156821)
AA seq 1402 aa
MKDLLNLFNQQRTTPEFDSIRIALASPELIRSWSYGEVKKPETINYRTFKPERDGLFCAA
IFGPIKDYECLCGKYKRMKHRGVVCEKCGTEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRIGLMLDMTLRDIERILYFEAFVVIDPGLTPLERGQLLSEDQYLEAVEEHGDEFDARM
GAEAVYELLKSLDLQGELVRLKEEIASTNSETKLKRLTKRAKLIEAFVESGNKPEWMVMT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELNAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGTNKRALKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPT
LRLHQCGLPKKMALELFKPFIFAKLQARGDAPTIKAAKKLVEREEPMVWDILEEVIREHP
VLLNRAPTLHRLGIQAFEPKLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSIEAQLEA
RALMMATNNILSPANGEPIIVPTQDVVLGLYYMTRELVNARGTGMAFSSVSEVRRAYDNR
VVDLHARIKVRMPRREASGHAEQPVTTLVETTVGRALLLEIMPEGLPFELANTELTKKAI
SRLINACYRRLGLKDTVIFADQLMYTGFRFATRAGISIGIDDMVIPAEKKAIIEEAEKEV
VEIQEQYQSGLVTAGERYNKVVDIWSRTNELVAKAMIDGIGTEKVVDANGKTVVQKSMNS
LFIMADSGARGSVAQIRQLAGMRGLMARPDGSIIETPIKANFREGLNVLQYFNSTHGARK
GLADTALKTANSGYLTRRLVDVAQDVVITSTDCGTEAGLTMQPIVEGGDVVEPLRERVLG
RVAAEDVYAPGNDDEPIVTRNTLLDEVLVERLDQAGVQAIKVRSPITCEAHHGVCALCYG
RDLARGHLVNMGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASRAAAVDNVTVKTTGTLKF
NNLKTVQHAQGHLVAVSRSGEVSVIDAHGRERERYKVPYGATITVKDGEPVKAGQTIANW
DPHTHPIVSEVAGTVRFIDFIDGVTVQSQTDELTGLESAVVTDPKRRGTAAKDLRPIVRL
EDEKGRELKLPGTDVPAQYFLPAGAIVSIQSGAKVGVGDVVARIPQETSKTRDITGGLPR
VADLFEARKPKEPAILAERSGVVSFGKDTKGKQRLIIKDVDGNEHEELIPKWRQVIVFEG
EHVEKGETVVDGEPNPHDILRLLGVEPLAAYLVKEIQDVYRLQGVKINDKHIEAIIRQML
RKVEITDPGDSNYLRGEQVERVRINEENERAIARGERPAEYQSVLLGITKASLATESFIS
AASFQETTRVLTEAAVRGTRDTLRGLKENVIVGRLIPAGTGLAYHAQRRRQGGLTASEIE
TLSGTSSAVTFAESAAEGGEQE
NT seq 4209 nt   +upstreamnt  +downstreamnt
atgaaagacttgctcaatctcttcaaccagcagcgcaccacgcccgagttcgattcgatc
cgcatcgcgctggcttcgccggagctgatccgctcctggtcgtatggcgaggtcaagaag
ccggagacgatcaactaccgcaccttcaagcccgagcgcgacggcctgttctgcgcggcc
attttcggtccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcatgaagcac
cgcggcgtggtctgcgagaaatgcggcaccgaggtgactctggccaaggtgcgccgcgag
cgcatggggcacatcgagctcgccagcccggtcgcgcacatctggttcttgaagtcgctg
ccctcgcgcatcggcctcatgctcgacatgaccctgcgcgacatcgagcgcatcctctat
ttcgaggccttcgtggtcatcgacccgggtttgaccccgctcgagcgcggccagctgctc
agtgaggatcagtacctggaggcggtggaagaacacggcgacgagttcgacgcgcgcatg
ggcgccgaggccgtctacgagctgctcaagagcctggatctgcagggcgaactggtgcgg
ctcaaggaggagatcgcctcgaccaattcggaaaccaagctcaagcgactgaccaagcgc
gccaagctgatcgaggccttcgtggaatcgggcaacaagcccgagtggatggtgatgacc
gtgctgccggtgctgccgccggacctgcgtccgctggtgccgctcgacggcgggcgtttc
gccacgtccgacctcaacgacctttatcgtcgcgtcatcaaccgcaacaaccgcctgaag
cggctgctcgagctcaacgcgcccgacatcatcgtgcgcaacgagaagcgcatgctgcag
gaggcggtggacgcactgctcgacaacggtcgccgcggccgcgccatcaccggtaccaac
aagcgtgcgctgaagtcgcttgccgacatgatcaagggcaagcaggggcggttccgccag
aacctgctcggcaagcgcgtggattattccggccgttcggtgatcgtggtcggcccgacc
ctgcgtctgcaccagtgcggcctgcccaagaagatggcgctcgagctgttcaagccgttc
atcttcgccaagctgcaggcgcgcggcgacgcgcccaccatcaaggcggccaagaagctc
gtcgagcgtgaggagccgatggtgtgggacatcctcgaggaggtgatccgcgagcatccg
gtgctgctcaaccgtgcgccgaccctgcatcgcctcggcatccaggcgttcgagcccaag
ctgatcgagggcaaggcgatccagctgcatccgctggtctgcaccgccttcaacgccgac
ttcgatggcgaccagatggccgtgcacgtgccgctgtcgatcgaggcgcagctcgaggcg
cgcgcgctgatgatggcgaccaacaacatcctgtcgccggccaacggcgagccgatcatc
gtgccgacccaggacgtggtgctcgggctctactacatgacccgcgaactggtgaacgcc
cgcggtaccggcatggcgttctcgagcgtcagcgaggtgcgtcgcgcctatgacaaccgt
gtggtcgacctgcatgcgcggatcaaggtgcgcatgccccggcgcgaagcctcgggccat
gcggaacagccggttaccacgctggtcgagaccacggtcgggcgcgcgctgctgctcgag
atcatgcccgaaggactgcccttcgagctggccaacaccgagctcaccaagaaggccatc
tcgcggctgatcaacgcctgctaccggcgcctgggcctcaaggacaccgtgatcttcgcc
gaccagctgatgtacaccggcttccgcttcgccacccgcgcaggcatctcgatcggcatc
gacgacatggtcatcccggccgagaagaaggcgatcatcgaagaggccgagaaggaggtc
gtggagatccaggagcagtaccagtcgggcctggtcaccgccggcgaacgctacaacaag
gtggtcgacatctggtcgcgcaccaatgaactggtcgccaaggcgatgatcgacggcatc
ggcaccgagaaggtcgtcgacgccaatggcaagaccgtggtgcagaagtcgatgaattcg
ctgttcatcatggccgactcaggtgcgcgcggctcggtggcgcagatccgccagctcgcc
ggcatgcgcggcctgatggcgcgtccggacggctccatcatcgagacgccgatcaaggcc
aacttccgcgagggcctcaacgtcctgcagtacttcaactccacccacggcgcgcgcaag
ggtctggccgacaccgccctcaagacggccaattcgggttatctgacccggcgtctggtc
gacgtcgcccaggacgtggtgatcacctcgaccgactgcggcaccgaagctggcctcacc
atgcagcccatcgtcgagggcggcgatgtggtcgagccgctgcgcgagcgcgtgctcggc
cgggtggccgccgaggacgtctatgcgccgggcaacgacgatgagcccatcgtcacccgc
aacaccttgctggacgaggtgctggtcgagcgtctcgaccaggccggcgtgcaagcgatc
aaggtgcgttcgccgatcacctgcgaggcgcatcacggcgtttgcgcgctgtgctacgga
cgcgatcttgcccgcggccatctggtcaacatgggcgaggccgtgggcgtggtcgccgcg
cagtcgatcggcgagccgggcacgcagctgaccatgcgcaccttccacatcggcggtgcg
gcgtcgcgtgccgcggccgtggacaacgtgacggtgaaaaccaccggcacgctcaagttc
aacaacctgaagaccgtgcagcatgcccagggccatctggtcgcggtgtcgcgttcgggc
gaggtgtcggtgatcgacgcccacggtcgcgagcgcgagcgctacaaggtgccctacggc
gcgaccatcacggtcaaggatggcgagccggtcaaggccggacagaccatcgccaattgg
gatccgcatacccatccgatcgtctcggaagtggccggcacggtgcgtttcatcgacttc
atcgacggcgtcaccgtgcagagccagaccgacgagttgaccggtctggaatcggcggtg
gtcaccgatcccaagcgccgcggcacggcggccaaggatctgcgtccgatcgtgcggctg
gaggacgagaagggtcgcgagctcaagctgcctggcaccgacgtgccggcgcagtatttc
ctgccggccggtgccatcgtgtcgatccagagcggcgccaaggtcggcgtcggcgacgtg
gtcgcgcgcatcccgcaggaaacctccaagacccgcgacattaccggtggtctgccgcgc
gtggccgacctgttcgaggcgcgcaagcccaaagagccggcgatcctggccgagcgttcc
ggcgtggtcagtttcggcaaggacaccaagggcaagcagcgcctgatcatcaaggacgtc
gacggcaacgagcatgaggagctgatcccgaagtggcgtcaggtcatcgtgttcgagggc
gagcacgtggagaagggcgaaaccgtggtcgacggcgagcccaatccgcacgacatcctg
cgtctcttgggcgtcgagccgctggcagcctatctggtcaaggagatccaggacgtctac
cggctgcagggcgtcaagatcaacgacaagcacatcgaggcgatcattcgccagatgctg
cgcaaggtcgagatcaccgatccgggcgacagcaactacctgcgcggtgaacaggtcgag
cgcgtacgcatcaacgaggaaaacgagcgtgccatcgcccgtggcgagcgtccggcggag
taccagtcggtcctgctcggtatcaccaaggcgtcgctggccaccgagtcgttcatttcg
gcggcctcgttccaggagaccacccgtgtgctgaccgaggcggcggtccgggggacacgg
gacaccttgcgcggcctcaaggaaaacgttattgtcggccgtctcattccggccggcacc
ggcttggcctaccatgcgcagcgtcgccgtcagggcggcctgaccgcatcggagatcgag
accctgtccgggacgtcttccgcggtgaccttcgcggagtccgcagccgaaggcggcgag
caggagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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