KEGG   Rhodobaca barguzinensis: BG454_15970
Entry
BG454_15970       CDS       T05218                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
rbg  Rhodobaca barguzinensis
Brite
KEGG Orthology (KO) [BR:rbg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rbg03032]
    BG454_15970
   03036 Chromosome and associated proteins [BR:rbg03036]
    BG454_15970
   03400 DNA repair and recombination proteins [BR:rbg03400]
    BG454_15970
DNA replication proteins [BR:rbg03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BG454_15970
Chromosome and associated proteins [BR:rbg03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    BG454_15970
DNA repair and recombination proteins [BR:rbg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      BG454_15970
SSDB
Motif
Pfam: Bac_DNA_binding HU-CCDC81_bac_2 HU-HIG HU-CCDC81_euk_2 EspB DUF2267 PqqD Poly_export
Other DBs
NCBI-ProteinID: ATX67129
UniProt: A0A2K8KCF6
Position
complement(3290266..3290556)
AA seq 96 aa
MTAKPMTKTQLVAALAEKMDADKKTATAALDAVAELVMQEVSAGGAITLPGIGKIMCRAR
PERQVRNPATGETMTKAADKAVKVTIAKALKDAVNG
NT seq 291 nt   +upstreamnt  +downstreamnt
atgaccgctaaaccgatgaccaagacccaactcgtcgcagcattggcagaaaagatggat
gccgacaaaaagactgctaccgctgcactggatgcggttgcggaactggtcatgcaggaa
gtgtctgccggtggcgcgatcacgctgcccggaataggcaagatcatgtgccgcgcccgc
ccagagcgtcaggtccgcaaccccgctacaggcgagactatgaccaaggcagcagacaag
gcagtgaaggtcacaatcgcgaaagccctgaaagacgcggtcaacggctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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