KEGG   Rhodocyclaceae bacterium Thauera-like: B4966_00015
Entry
B4966_00015       CDS       T05394                                 
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
rbh  Rhodocyclaceae bacterium Thauera-like
Brite
KEGG Orthology (KO) [BR:rbh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rbh03032]
    B4966_00015
   03400 DNA repair and recombination proteins [BR:rbh03400]
    B4966_00015
Enzymes [BR:rbh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     B4966_00015
DNA replication proteins [BR:rbh03032]
 Prokaryotic type
  DNA Topoisomerases
   B4966_00015
DNA repair and recombination proteins [BR:rbh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      B4966_00015
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook Toprim_4 HATPase_c_3
Other DBs
NCBI-ProteinID: AUL98732
UniProt: A0A2K9L6K9
Position
2703..5195
AA seq 830 aa
MSEQHNTPTTSANVYDESSIQQLEGLEAVRKRPGMYIGDTSDGTGLHHMVFEVVDNAIDE
ALAGHCDEIVVTIHADNSISVADNGRGIPVGIKMDDKHEPKRSAAEIVMCVLHAGGKFNQ
NSYKVSGGLHGVGVSCVNALSKWLRLTIRRDGKKHFMEFRRGVPVDRVIEVVDGVQVSPL
RVTGETTKRGTELHFLADEEIFGTVEFHYEILAKRLRELSFLNNGVKIRLIDQRTGKEED
FAFAGGVRGFVEFINRTKTVLHPTVFYAEGSTRIPTGAGHEAELTVEVAMQWNDSYQEQV
LCFTNNIPQSDGGTHLTGLRAAMTRVINKYIEENEIAKKAKVDITGDDMREGLACVLSVK
MPDPKFASQTKMKLVSSEARPAVEEVVAGKLTDFLLENPIDAKTICNKIVEAARARDAAR
KAREMTRRKGVLDGIGLPGKLADCQEKDPALCELYLVEGDSAGGSAKQGRDRKFQAILPL
KGKILNVEKARFDKLLQSQEIATLITALGTGIGKDDYKPEKLRYHRIIIMTDADVDGAHI
RTLLLTFFYRQMPELVERGHIYIAQPPLYKIKHGKTELYIKDDHELNNHLLKLALDGAAL
LPREGAQPIADEALGGLARSYLLAEAVTRRLSGLIDPEVLQVMLAHNIEVSLADQAAAQA
SAARIRTHLPDGIGIRAEFHDETEAWRLVIERLHHGNLKFSAIEEDFLVSSDYRSIRNAS
EAIAGLIGPGAEIRRGDKRQPVTRFADAIGWLLNEVERGLTKQRYKGLGEMNPEQLWETT
MDPAVRRLLRVQIDDAIAADEIFTTLMGDDVEPRRAFIENNALYAQNIDV
NT seq 2493 nt   +upstreamnt  +downstreamnt
atgtccgaacagcacaacacgcccacgacctctgccaacgtctatgacgagtccagcatt
cagcaactcgaagggctcgaagccgtacgcaagcgcccgggtatgtacattggtgacacc
tcggacggcaccggtttgcatcacatggtgttcgaagtggtcgacaacgccattgacgaa
gccttggccggccactgcgatgaaatcgtggtcaccattcacgccgacaactccatctcg
gtggccgacaacggccgcggcattccggtcggcatcaaaatggacgacaagcacgagccc
aagcgctcggcagcggaaatcgtcatgtgcgtgctgcatgccggtggcaaattcaaccag
aacagttacaaagtctcaggcggtctgcacggtgtgggcgtgtcctgcgtcaacgcccta
tccaagtggctgcgcctgaccatccgtcgcgatggcaaaaaacatttcatggaattccgt
cgtggggtgccggtcgatcgcgtcatcgaagtggtcgacggcgtacaagtctcccctttg
cgcgtcaccggtgagaccaccaagcgcggcaccgaactgcattttcttgccgatgaggaa
atctttggcaccgtcgaatttcactacgaaatcctcgccaagcgcctgcgcgaactttcc
tttctcaacaacggcgtcaaaatccgcctgatcgatcagcgcaccggcaaggaagaagat
tttgcctttgccggtggcgtgcgcggcttcgtggaattcatcaaccgcaccaaaaccgtg
ctccacccgacggtgttttacgccgaaggcagcacccgcattcccaccggcgcaggtcac
gaggccgaactgacggtcgaagtggccatgcaatggaacgacagctaccaggaacaggtg
ctgtgctttaccaacaacatccctcagtctgacggcggcacccacctcaccggtctgcgc
gccgccatgacccgggtaatcaacaaatacattgaagagaacgagatcgccaaaaaggcc
aaggtcgacatcaccggcgacgatatgcgcgaaggtctggcctgcgtgctctcggtgaag
atgcccgaccccaaattcgccagccagaccaagatgaagctggtgtcttccgaagcgcgc
ccggcagtcgaagaagtggtggccggcaaattgaccgactttctgctggaaaacccgatc
gacgccaaaaccatttgcaacaagatcgtcgaagccgcgcgtgcccgcgatgccgcccgc
aaggcgcgcgagatgacccgccgtaaaggcgtgctcgacgggattggtctgcccggcaaa
cttgccgactgtcaggaaaaagaccctgcgctgtgcgaactctacctggtggaaggcgac
tcggccggcggctcggccaagcagggccgcgaccgcaaatttcaagcgatcctgccgctc
aagggcaagattctcaacgttgaaaaagcccgcttcgacaagctcttgcaaagccaggag
atcgccacgctgatcaccgcgctcggcaccggcatcggcaaagacgattacaagcccgaa
aagctgcgttaccaccgcatcatcatcatgaccgacgccgacgtggatggcgcgcatatc
cgcaccctgctcttgacctttttctaccgccagatgcccgaactggtcgagcgcggtcac
atctacatcgcccagccgccgctctacaagatcaagcacggcaaaaccgagctctacatc
aaagacgaccacgagctcaacaaccacctgctcaagcttgccctcgacggcgccgcgctg
ctgccgcgcgaaggcgcacaaccgatcgccgatgaagccctgggcggcttggcgcgcagc
tatctgctcgccgaagcggtcacccggcggctttccggcttgatcgacccggaagtgctg
caggtcatgctggcgcacaacatcgaagtcagcctggctgaccaagctgccgcacaagcc
tccgccgcccgaatccgcacccatctgcccgatggcatcggcatccgcgccgagttccat
gatgaaaccgaagcctggcgcctggtcatcgaacgcctgcaccacggtaacctcaagttc
agcgcgattgaggaagacttcctggtctccagtgactaccgcagcatccgcaacgcctcg
gaggccattgccggcctgatcggccccggcgccgaaatccgccgcggcgataagcgccag
ccggtcacccgcttcgccgatgccatcggctggctgctcaatgaagtcgagcgcggcttg
accaaacagcgctataagggtctgggcgaaatgaacccagagcagctgtgggagaccacc
atggacccggcggtacgtcgcctgttgcgtgttcagatcgatgacgccatcgccgccgac
gagatcttcaccacactcatgggcgacgatgtcgagccgcgtcgcgccttcatcgaaaac
aacgccctgtacgcgcaaaacatcgacgtctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system