KEGG   Rhodocyclaceae bacterium Thauera-like: B4966_01260
Entry
B4966_01260       CDS       T05394                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
rbh  Rhodocyclaceae bacterium Thauera-like
Brite
KEGG Orthology (KO) [BR:rbh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rbh03032]
    B4966_01260
   03036 Chromosome and associated proteins [BR:rbh03036]
    B4966_01260
   03400 DNA repair and recombination proteins [BR:rbh03400]
    B4966_01260
DNA replication proteins [BR:rbh03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    B4966_01260
Chromosome and associated proteins [BR:rbh03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    B4966_01260
DNA repair and recombination proteins [BR:rbh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      B4966_01260
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 DUF2267 HU-CCDC81_bac_2 HU-CCDC81_euk_1 HYPK_UBA
Other DBs
NCBI-ProteinID: AUL98953
UniProt: A0A2K9L723
Position
278203..278481
AA seq 92 aa
MNKGEFVEALADRLDVSRAQADRALSGVLDLIAEQLAKGEKVAFTGFGSFEVSKRAERTG
RNPQTGATIKIAASSVPKFTAGATLKAAVNGK
NT seq 279 nt   +upstreamnt  +downstreamnt
atgaacaaaggtgaattcgtcgaagccttggccgaccgcctggatgtttcccgcgctcaa
gccgaccgcgccctgtcgggcgtgctcgacctcatcgctgagcaactggccaagggcgaa
aaggtggcctttaccggttttggctccttcgaggtttccaaacgcgccgagcgcaccggt
cgcaatccgcagaccggcgccaccatcaagattgccgcctccagcgtgcccaaattcacc
gctggtgcaaccttgaaagcggcggtcaacggcaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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