KEGG   Robiginitalea biformata: RB2501_10075
Entry
RB2501_10075      CDS       T00992                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
rbi  Robiginitalea biformata
Pathway
rbi02024  Quorum sensing
rbi03060  Protein export
rbi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rbi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    RB2501_10075
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RB2501_10075
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RB2501_10075
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rbi02044]
    RB2501_10075
Enzymes [BR:rbi01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     RB2501_10075
Secretion system [BR:rbi02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   RB2501_10075
  Eukaryotic Sec-SRP protein
   RB2501_10075
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin AAA_22 cobW CLP1_P CbiA AAA_17 AAA_24 AAA_33 APS_kinase nSTAND3 KTI12 SDH_sah TsaE AAA_18 ATP_bind_1 6PF2K AAA_16 DO-GTPase1 AAA NACHT MMR_HSR1
Other DBs
NCBI-ProteinID: EAR17243
UniProt: A4CJY5
Position
1497304..1498599
AA seq 431 aa
MHVLRGHGQITEINVAETTKEIRRALLDADVNFKIAKEFTNTVKEKAIGQNVLTTLQPGQ
LLTKIVKDELTQLMGGEAEGVDLQGSPAVILMSGLQGSGKTTFSGKLANFLKSKKTKNPL
LVACDVYRPAAIDQLHVVGDQIGVPVFSDKEVKDPVQLAKAGVAHAKQNGHNVVIIDTAG
RLAVDEQMMTEISNIRDAVSPGEILFVVDAMTGQDAVNTAKAFNDVLDFDGVVLTKLDGD
TRGGAAISIKSVVDKPIKFIGTGEKMEAIDVFHPSRMADRILGMGDVVSLVERAQEQFDE
EQARKIQKKIAKNRFGFDDFLSQIHQIKKMGSMKDLVGMLPGAGKALKGMDIDDDAFKHI
EAIIYSMTPDERSNPSLLDARRKRRIAAGSGTSIQEVNQLLKQFNQMSKMMKMMQGGGGK
KMMQMMQNMRP
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgcacgtgctgcgcgggcacgggcagatcacggagatcaacgtggcggagaccaccaag
gaaatccgccgggccctgctcgacgcggacgtcaacttcaagatcgccaaggagttcacc
aatacggtcaaggaaaaggccatcgggcagaacgtgcttaccacgctgcagcccgggcag
ctgctgaccaagattgtcaaggacgagctcacccagctcatgggcggggaggccgaaggg
gtggacctgcaggggagcccggcggtgattctgatgtccggccttcagggttcgggtaag
accacgttttccgggaagcttgccaatttcctcaaatcaaagaaaacaaagaaccccctg
ctggtggcctgcgacgtctaccgcccggcagctatcgaccagttgcacgtggtgggagac
cagatcggcgtcccggtcttttccgacaaggaagtgaaggacccggtacaactcgccaag
gccggggtggcacacgcgaaacaaaacggacacaatgtggtgatcatcgatacggccggt
cggctggccgtggacgagcagatgatgaccgagatctcgaatatccgcgacgcggttagc
cccggcgaaatactctttgtggtggatgccatgaccgggcaggacgcggtgaatacggcc
aaggcctttaacgatgtgctggactttgacggggtggtactcaccaagctcgacggggat
acccgtgggggggcggccatttccatcaaatccgtggtggacaagcccatcaaatttatc
ggtacgggggaaaagatggaggccatcgatgtattccacccttcccgtatggccgaccgg
atcctggggatgggcgacgtggtttccctggtggagcgcgcccaggagcagttcgacgaa
gagcaggcccggaagatccagaaaaagatcgccaagaaccggtttggttttgacgatttc
ctgagccagatccaccagatcaagaaaatgggcagcatgaaggacctggtggggatgctc
cctggggcaggcaaggcgctcaaaggcatggacatcgatgacgacgccttcaagcacatc
gaggccatcatctattcgatgacgccggacgaacgctccaatccgtccctgctggacgcc
cgccgtaaaaggcggatcgcggcgggaagcggcacgagtatccaggaggtaaaccagctc
ctgaaacagttcaaccagatgagcaagatgatgaagatgatgcagggcggcggcggcaag
aagatgatgcagatgatgcagaacatgcggccctag

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