KEGG   Rickettsia bellii OSU 85-389: A1I_06555
Entry
A1I_06555         CDS       T00602                                 
Name
(GenBank) Ribonuclease E
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
rbo  Rickettsia bellii OSU 85-389
Pathway
rbo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rbo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A1I_06555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rbo03019]
    A1I_06555
   03009 Ribosome biogenesis [BR:rbo03009]
    A1I_06555
Enzymes [BR:rbo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     A1I_06555
Messenger RNA biogenesis [BR:rbo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     A1I_06555
Ribosome biogenesis [BR:rbo03009]
 Prokaryotic type
  rRNA processing factors
   A1I_06555
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1
Other DBs
NCBI-ProteinID: ABV79627
Position
complement(1251659..1253740)
AA seq 693 aa
MNKKIIIDANFSNETRVVLLGQSNNIEDIEFQTTRKQQNKGNIYLAKVTRIEPSLQAVFI
EYGMDKSGFLPFSEIHPNYYNLPASEKNFPINAFPEIVPPNIILDDEDEVRAATSYDPLI
DGEEIDLKAIEDLVESKFQSELNLEAADDIEIIQSDKEENIPQYKQYKVQDVIRKNQILL
VQVTKEERGNKCAAFTTYVSLAGKYCVLMPNKAAQNGISRKISNGDERKRLKNILNKVVN
GDKSPYSVIIRTAGRGCSTLDLKKDYSYLSRLWNKIRKSTVKFPAPCFIHEEDSIIRKTI
RDMCDHNVKEVIIYGQEAYEDAAKFMQDLLPSEMTKLKEHKSKTPIFTKFQVEEQLIKLY
QPVVTLPSGGYIVINPTEALISIDVNSGRSTSEKNIEETALKTNLEAAKEIARQVKLRDL
SGLIVVDFIDMDETKNRKIIERSFKEFLSRDRARIQTGNISQFGLLEFSRQRLRFSFLET
NSSICSHCNGKGVVRADESNAMLILRTIENEIFEDRIDIINVFANVSSVIYLLNNKRQEI
KFIEEKYNIRLNFYSDPNATSDSYSIEKVKLLKKNNNNLNAGKPVIQNHSADYTEEEPKK
EQLRKNKHKWKTGNNNNVVSEEKKKVPEIKEVKDQVVSVVKEEVEITDDGVVVEEKPLPK
KTKRRYRNKKSNKNRPVANKESSVAEDSGGSEG
NT seq 2082 nt   +upstreamnt  +downstreamnt
atgaataaaaagataataattgatgctaatttctcaaatgaaacaagagtagttttattg
ggacaaagcaataatatagaagatattgaatttcaaacaacaagaaaacaacaaaataaa
ggtaatatttatttagcaaaagtaacgagaatagagccatctttgcaagctgtgttcata
gaatatggtatggataaaagtggctttttgccttttagcgaaatacatcccaattattat
aatttacctgcatcagagaagaattttccaattaacgcatttcctgagatagtaccacct
aatatcattcttgatgatgaggatgaggtgcgggcagctacttcatatgacccattaatt
gatggtgaagaaatcgatctaaaggctatagaggatttagtagagagtaaatttcagtca
gagcttaatttagaagcagcagatgatattgaaattatccaaagcgataaggaagaaaat
attcctcaatataagcaatataaagtacaagacgtaataagaaaaaaccaaatattacta
gttcaagttactaaagaggagcgtggaaataaatgtgcagcttttactacttatgtatct
ttagcgggtaaatattgtgttttaatgcctaataaagcagcacaaaatggtatatctcgt
aaaatatcaaatggtgatgaaagaaaaagacttaagaatattttaaataaggtagtaaac
ggcgataagagtccttatagcgtaattatcaggacagcaggtagaggttgtagtactttg
gacctgaaaaaagattatagctatttatcaaggttatggaataaaatccgtaagagtact
gttaaatttccagctccttgctttattcatgaagaagatagcataatacgtaaaactata
cgtgatatgtgtgatcataatgtcaaagaggtcataatttatgggcaagaagcatatgaa
gatgcggcaaaatttatgcaagatttgctaccttcagagatgacaaaacttaaagagcat
aaaagtaaaactcctatatttactaagtttcaagtagaggaacaattaattaagctatat
cagcctgtggtaactttaccttcaggaggatatattgttattaatccaactgaagctctt
atttctatagatgtgaattccggtagatcaacttctgaaaaaaatattgaagaaacagcc
ttaaaaactaatttagaagcagcaaaagaaatagcaagacaagttaagcttagagattta
tcaggtcttatagttgttgatttcattgatatggatgaaacaaaaaatcgtaaaattatt
gagagatcttttaaagaattcttaagtcgtgatcgtgcacgtatacaaaccggtaatatt
agccagtttggattgcttgaattttcaaggcaaagattacgtttttctttcctagaaact
aattcttcaatttgttctcattgtaatggcaaaggtgttgttagagccgatgagtcgaat
gctatgctaatcttgcgtactattgaaaatgaaattttcgaagatagaattgatataata
aatgtttttgctaatgtttcttcggtgatttatctacttaataataaacgtcaggaaata
aagtttattgaagagaaatataatataaggctcaatttttattctgatcctaacgctaca
tctgatagctattcaatcgaaaaagtaaaattattaaagaaaaataataataacctcaat
gctggtaagccggtgattcaaaatcatagtgctgattataccgaagaagagcctaaaaaa
gagcagctacgtaaaaataagcataaatggaaaacaggcaataataataacgtcgtcagt
gaagaaaagaaaaaagtacctgaaataaaagaggtaaaagatcaggtagtaagtgttgta
aaggaagaagtagagattacagatgatggtgtagtagtagaagaaaaaccactaccaaaa
aagacaaaacgcagatatcgtaataaaaaatcgaataagaaccgtcctgtggctaataaa
gagagttctgtggcagaggatagcgggggcagtgaggggtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system