KEGG   Ruminococcaceae bacterium CPB6: B6259_00055
Entry
B6259_00055       CDS       T04880                                 
Name
(GenBank) DNA gyrase subunit A
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
rbp  Ruminococcaceae bacterium CPB6
Brite
KEGG Orthology (KO) [BR:rbp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rbp03032]
    B6259_00055
   03400 DNA repair and recombination proteins [BR:rbp03400]
    B6259_00055
Enzymes [BR:rbp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     B6259_00055
DNA replication proteins [BR:rbp03032]
 Prokaryotic type
  DNA Topoisomerases
   B6259_00055
DNA repair and recombination proteins [BR:rbp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      B6259_00055
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C TPD52
Other DBs
NCBI-ProteinID: ARP49420
UniProt: A0A1W6WAZ1
Position
8340..10904
AA seq 854 aa
MDEIQNENKSKIIDVDLEKEVQKSFMAYSMSVIVQRALPDVRDGLKPVHRRILYAMYEDG
ITPDKPYKKCATTVGDVLGRYHPHGDASVYDALVRLAQDFSMRYMLVDGHGNFGSVDGDP
PAAYRYTESRMSRLSVEMLRDIDKNTVDFGSNFDDSRKEPTVLPGHFPNLLVNGSTGIAV
GMATNIPPHNMGEVLDGVCALIDDPDIGLEGLMQYIKGPDFPTAGIIMGRAGIRAAYATG
RGRITVRARAEIVEEKNGRFSIVVTELPYQVNKARLIENMADLVKNKRITGISNIEDHSD
RNGMHILITLKRDASPQIILNQLYSYTQLQTTFSVNMLAIVGAHGSYSGEPKLLTLKQIL
QEYVAFQKDVITRRTKYDLKKALARAHILEGLKIAVDNIDEIIAIIRSSRDRAAARARMT
ERFGLDDIQTQAIVQMPLGALTGLERKKLEEELAAIEAKVADLRDILAHEERVLAIIKED
AQNVKKKFGDERRTEIVSVSGEVDIEDLIPDEECVLTLTNFGYAKRLAADTYHTQNRGGR
GISAMTRRDEDFASEMFVCGSHDYVLFFTNFGRVYRLKCYEVPEGSRTSKGVNIANLLPI
SQGESVTSMIRVPEFDDESYLCMVTRNGIIKRTALSAYNTARKGGVIALGLDDGDELCWV
RLTSGDDELLVATHFGMAIRFNENDVRPMGRAARGVKAITLKESDYVVGMSILREGGRVL
TVSETGFGRLSPIEDYRIQNRGGKGLTNYHIDKYGCVAGIKVVDLTDDIILISEDGILIR
IPADSIRICSRPSKGVKVMRLNGTDKVVTLARTEHEEDVQMDELPDNGDNDDETEGADDS
AETEDQQPEEQEEN
NT seq 2565 nt   +upstreamnt  +downstreamnt
atggatgaaatacaaaatgaaaataaatcaaaaattatcgatgtagacctggaaaaggaa
gtacaaaaatcctttatggcatattctatgtcggtcattgtacagcgtgcattaccggat
gtacgggacgggctgaagcctgtccaccgccggattctgtacgccatgtatgaggacggc
attacaccggataagccctataaaaaatgtgcaaccaccgtcggcgacgtgctgggccgg
tatcatccgcacggcgacgcctctgtgtatgacgcgctggtacgtttggcacaggatttt
tccatgcgctatatgctggtagacggccacggcaactttggctccgtggacggtgacccg
ccggctgcttaccgttatacagaatcccgcatgagccgcctgtccgtagaaatgctgcgc
gatattgataagaatacggtcgattttggttcgaactttgatgacagccgcaaggaaccc
acggtactgcccggccattttccaaacttgctggtcaacggctccacgggtattgcggtc
ggtatggcaaccaatattccaccgcacaatatgggagaagttctggacggcgtctgtgcc
cttattgacgatccggatatcggcctggaaggtctgatgcagtacattaagggaccagat
ttcccgacagccggtatcattatgggccgtgcgggtatccgtgccgcttatgcaaccgga
cgcggccgcatcacggtgcgtgcccgcgcggaaattgtggaggagaaaaacggccgcttc
agcattgttgttacggaactgccctatcaggtcaacaaagcacgcctgattgaaaacatg
gcggaccttgttaaaaacaagcgcattactggcatttccaacattgaggaccattcagac
cgcaacggcatgcatattcttattacgctcaagcgggacgcttcccctcagattatcctg
aaccagctgtattcttacacccagctgcagacaaccttcagcgtcaatatgctggcgatt
gtcggtgcacatggcagctacagcggcgagccaaaactgctgaccttaaagcagattttg
caggaatatgtggcctttcagaaggacgtcattacacgccggacaaagtatgacttgaaa
aaggcactggcccgtgcgcatattctggaaggattaaaaattgccgtcgataatatcgat
gagattattgccattatccgttccagccgtgaccgtgctgcggcgcgtgcgcgtatgacg
gaacgttttgggttggacgatatacaaacacaggccattgtgcagatgcctttgggtgcc
ctgaccggtttggaacgcaaaaaactggaagaagaactggctgccatagaggcaaaagtg
gcggacctgcgcgatattttggcacacgaggagcgtgtccttgctatcattaaggaagac
gcgcagaatgtcaagaaaaagttcggcgatgaacgccgcaccgaaattgtttctgtttcc
ggtgaagtggatattgaggacctgattccagacgaggaatgtgtgctgacactgacgaac
ttcggttatgccaagcgtctggcggcggatacctatcacacacagaaccgcggcggacgg
ggcatcagtgctatgacacgtcgggatgaggattttgccagtgagatgtttgtgtgcggc
agccatgattatgttttgttctttaccaattttggccgtgtgtaccgtctgaagtgctat
gaagtgccggagggcagccgtaccagcaagggtgtcaatattgccaacctgctgccgatt
tcacagggcgaaagtgtcacctccatgattcgtgtgccggagtttgacgatgaaagttat
ctgtgtatggttacccgcaatggcattattaagcgcacagcgctgtccgcgtataatacg
gcgcggaagggcggcgtgattgcgctgggtttggacgacggtgacgagctgtgctgggtg
cgtctgacaagcggcgatgatgagctgctggttgctacccattttggtatggccattcgg
tttaatgaaaatgatgtgcgtccaatgggccgtgcggcgcgcggtgttaaggcgattacc
ctgaaagaaagcgactacgttgtcggcatgagtatcctgcgggaaggcggccgtgtgctg
acagtcagtgaaactggctttggccgtctgtcaccgattgaagattaccgcattcaaaac
cgtggcggcaagggtcttacgaactaccatattgataaatatggctgtgtggccggcatt
aaagttgtggacctgacagacgatattattttaatttcggaggacggcattcttatccgt
attccggcagattccattcgtatttgttcccgtccgagcaagggtgtcaaagtaatgcgg
ctgaacggcaccgacaaagttgtcacgcttgcccgtacagagcatgaggaagacgtgcaa
atggacgaactgccggacaacggtgacaatgacgatgaaacggaaggcgctgacgattca
gctgaaacggaagaccagcagcctgaagagcaggaagaaaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (176)   
   KEGG ORTHOLOGY (1)   
   RefGene (173)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (186)   

Download RDF
DBGET integrated database retrieval system