KEGG   Rugosibacter aromaticivorans: PG1C_02565
Entry
PG1C_02565        CDS       T03689                                 
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
rbu  Rugosibacter aromaticivorans
Pathway
rbu00470  D-Amino acid metabolism
rbu00550  Peptidoglycan biosynthesis
rbu01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rbu00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PG1C_02565 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    PG1C_02565 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rbu01011]
    PG1C_02565 (murD)
Enzymes [BR:rbu01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     PG1C_02565 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:rbu01011]
 Precursor biosynthesis
  Amino acid ligase
   PG1C_02565 (murD)
SSDB
Motif
Pfam: Mur_ligase_M MurD-like_N Mur_ligase_C NAD_binding_7 NYN 2-Hacid_dh_C
Other DBs
NCBI-ProteinID: AJP47644
UniProt: A0A0C5J7P5
Position
503292..504686
AA seq 464 aa
MSDLQGKHILVLGLGESGLASACWCAESGARVRVADTRVNPPYLAELHRRVTSADFLAGA
FELHLLDGVDRVVLSPGLPGDLPIVREAAARGLPVVGEIELFARALRELNSPAPVLAITG
TNGKTTTTALTGHLLRSMGQRVGVAGNISPAALMALSTYVAQDDLPQIWVLELSSFQLET
TTSLQPAAATVLNISDDHLDRYDDLAAYAAVKARIFQGAGVQVVNRQDAYVNAMLLAGRH
ALSFGLDAPQAATDFGLRQQAGELWLAQGEQFLLPVSELPVQGLHNAANVMAALALCASL
GYDVQQLLPAVCSFQGLPHRVEKVVERDGVTWYDDSKGTNVGATVAALEGIGNQHDRKIV
LIAGGDGKGQDFSPLASAVARWARAVVLIGRDGPLIGSVLENSGVPLVFATNMSDAVQQA
SVLAQNNDAVLLSPACASFDMFRDYQQRAEVFIAAVKNLAKATS
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgagcgatttgcaaggcaaacatattctcgtgctcggcctgggtgaatcaggcctggct
tctgcgtgctggtgcgcagagtcgggtgcgcgggtacgtgtggcggatacgcgggtaaac
ccaccgtatcttgctgagttgcatcgccgtgtcaccagcgccgactttttggccggtgcg
tttgaactgcatttgctggatggtgttgaccgggttgtgttgtcgcccggtttgcccggt
gatctgcccatcgtgcgcgaagcggcggcacgcggtctgcccgtggtgggtgaaattgaa
ctctttgcgcgcgccttgcgtgaattaaattcgcctgctcccgtgctggcgattaccggt
accaatggcaagaccaccaccaccgcactcacggggcatttgttgcgcagcatggggcaa
cgcgtgggcgtggcgggcaatatttctcctgcggcactgatggcgctgagtacctatgtt
gcgcaggatgatttaccccagatttgggtgctggagttatccagctttcagctcgaaacc
acgacatcgttacagccggctgccgctacggtccttaatatttcagatgatcatcttgat
cgttacgatgatctggctgcctatgcagcggttaaagcgcgcatctttcagggcgctggg
gtgcaggtcgttaaccggcaggatgcctatgtgaacgcgatgctcttggctggtcgtcac
gcgctcagtttcggcctggatgcgccgcaggcagcaacagattttgggctgcggcaacag
gcgggtgagttgtggctggcacagggcgagcaattcttgctgccagtgtctgagctgcct
gtgcagggtttgcataatgcggcaaatgtcatggcggcgctggcgctgtgcgcgagtctg
ggttatgacgtccagcaattattgcccgccgtgtgcagttttcaaggcttgccgcatcgg
gttgaaaaggttgtcgagagagacggtgtgacctggtatgacgattcaaaaggcaccaac
gtcggagcgactgtggcggcattggaaggtatcggcaatcaacacgatcgtaagatcgtg
ttgattgccggaggcgatggcaaggggcaggatttttcaccgctggcatccgccgttgcg
cgatgggcgcgcgcggtagtcttgatcggtcgcgatggaccgctcatcggcagcgtcctt
gaaaatagcggcgtgccgttggttttcgcaaccaatatgagcgacgcggtacagcaggca
agcgtcctggcacaaaataacgatgcggtattgctctcaccggcctgtgccagttttgac
atgtttcgcgactatcagcagcgggcagaagtctttatcgccgcggtgaaaaatttagcg
aaagcaacgtcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (33)   

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