KEGG   Rugosibacter aromaticivorans: PG1C_04660
Entry
PG1C_04660        CDS       T03689                                 
Name
(GenBank) hypothetical protein
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
rbu  Rugosibacter aromaticivorans
Brite
KEGG Orthology (KO) [BR:rbu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rbu03016]
    PG1C_04660
Enzymes [BR:rbu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     PG1C_04660
Transfer RNA biogenesis [BR:rbu03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    PG1C_04660
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2
Other DBs
NCBI-ProteinID: AJP47946
UniProt: A0A0C5JKP3
Position
937720..938397
AA seq 225 aa
MKTAVNKHRVFFALLPDEEIASHLAALGQHVAARSGSRLTPVHNLHLTLVFAGGVTSAQM
DTLVACAHTVSAAFGASLEVENEHEGELDLRVRLNRLGFWPQGGVLWAGCRLLPSNQHRP
VTDARLFADSPAMMSALSAGALPWMLAAQLKHALLAAGLPMTLSMAPQFFVPHVTLARGV
RCASLPRLGSPLGWSVREFVLLESIPQGMHPRYETRAVFPLYPDN
NT seq 678 nt   +upstreamnt  +downstreamnt
atgaaaactgccgtgaataaacatcgcgttttttttgcactattgcccgatgaggaaatt
gcctcgcatctcgcggctttggggcagcatgtggctgctcgtagtggcagccgtctcacg
cccgtgcacaacctgcatctgacgcttgtctttgcgggcggagtgacttcagcgcagatg
gatacgctagtggcttgcgctcacacggtgagtgctgcatttggcgcatcgcttgaggtg
gagaatgagcacgaaggcgaactcgacttgcgcgtgcgtctcaatcggcttggtttttgg
ccacaaggaggcgtgctctgggcggggtgtcgtttgttgccgtctaaccagcatcgtcca
gtgacagacgcaagactttttgcagattcgcctgcgatgatgtctgcactgagtgctggt
gcgcttccctggatgctggcggcccagctcaagcatgctttattggcggcgggcttgcct
atgacactgtccatggcaccgcaattttttgtgccgcatgtcacgcttgcgcggggtgtg
cggtgcgcatcgctgccgcgtctgggctcaccgctcggttggtctgtgcgtgagtttgtg
ctgctcgaatcgattccgcaggggatgcatccgcgctatgaaacgcgggcggtatttccg
ttgtatcccgataattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system