KEGG   Rhodococcus pyridinivorans TG9: CEJ39_03340
Entry
CEJ39_03340       CDS       T05830                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
rby  Rhodococcus pyridinivorans TG9
Brite
KEGG Orthology (KO) [BR:rby00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rby03021]
    CEJ39_03340
Transcription machinery [BR:rby03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CEJ39_03340
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_ECF Bmp
Other DBs
NCBI-ProteinID: AWZ23342
Position
complement(701253..701825)
AA seq 190 aa
MTGVGGHTGTLGELLGRVARQDPTAFAELYDATRSRVFGMVLRVLRDPGYSEETTQEVYL
QVWRSADKYDPRQGSALSWIITLAHRRAVDRVRSEQSGADRESQYGSTNVDAAFDSVSEE
VAQRDDRRRVNECLGSLTELQRRSVELAYYRGFTYTEVAEELSSPLPTVKSRIRDGLKRL
KNCLGVTVDG
NT seq 573 nt   +upstreamnt  +downstreamnt
atgaccggcgtcggaggccataccggtaccctcggcgaactgctcgggcgggtggcccgg
caagaccctacggcgttcgccgaactgtacgacgcgacgcgttcccgagtcttcggcatg
gtgctgcgggtcctgcgggatcccggttacagcgaggagaccacccaggaggtctacctc
caggtatggaggtcggccgacaagtacgacccgcgtcagggttccgctctgtcgtggatc
atcacgctcgcccatcggcgtgccgtcgaccgggtccgcagcgaacagtccggagccgac
cgcgagtcgcagtacggttcgacgaacgtcgacgcggccttcgactcggtgagcgaggag
gtagcgcagcgcgacgatcgccgccgggtgaacgagtgcctgggttcgctcaccgaactg
cagcgacgctcggtcgagctcgcctactacagaggctttacgtataccgaagtggcagaa
gaactttcgtccccgttgccgacggtcaagtcgcgcatccgggacggcctgaaacgactg
aagaattgtctgggggtgactgtggatggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (10)   

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