KEGG T05830: CEJ39

Rhodococcus pyridinivorans TG9: CEJ39_08445

Entry

CEJ39_08445       CDS       T05830

Name

(GenBank) ATP-dependent dsDNA exonuclease

K03546

DNA repair protein SbcC/Rad50

Organism

rby Rhodococcus pyridinivorans TG9

Brite

KEGG Orthology (KO) [BR:rby00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rby03400]
    CEJ39_08445
DNA repair and recombination proteins [BR:rby03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CEJ39_08445
    Archaeal homologous recombinant proteins
     CEJ39_08445

SSDB

Motif

Pfam:

AAA_23 SbcC_Walker_B AAA_27 SMC_N AAA_29 AAA_15 DotD

Other DBs

NCBI-ProteinID:

AWZ26891

Position

1774897..1777875

AA seq 992 aa
MRLHHLEITAFGPFADTVEIDFDELGADGLFLLHGQTGAGKTSILDAVAFALYGTVPGAR
SEGRRLLSDHARVGAVPTVRLEATIAGRRLAIERSPEFERPKKRGTGTIKQQAKANLTWL
DGSGENLSRAQEIGDVVKSLLGMSAEQFFQVVLLPQGDFARFLRANSEERGRLLERLFDT
TRFGDVEQWFRDRRGAGTKLLAEQQKKVEVLAAKVAASAGIEAGADADPVEWAGRLLAEA
AESRDDAAAALARVRAVDEVNRRRLDETVALADRLRRRRDALNILAELEQTQTQRVAVTA
ERDAAHRAVSVAVVDREAARLAREADAAVARAETAAAPLRNDDEGRELLQAVGPMSSAAD
RDIIRPRCEEWSSEAARLDVLLDRRRRLTELENEREKFAGRRRALTDERRQVIDERAALP
ERSTAAADAVAEAERAAAMLLGLSTARDRAADALDAATELASRRNELERLEARVLQLHSE
HNHARDAHLDVRQRRIDGMAAELAARLTDGEPCMVCGSTEHPEPARPAPDTATKADEERA
HAAEQRAATALSEAREAVTELSGIVAVLRQRCGDAELAELTTAHAEAVRAHNEAATVAGR
LDHLRATVEDLRKLDTVLAEQEKRLDAELSELAREDAVRAAEITEIRERIVEAVGDLDLL
APRRRTVAALSAAATALLDARTAALQARTAADERAADARTAAAEAGFTDLDSARAAVRTP
ERLAEIDRVLRAADDERAVATSTLNDPAIAALTGDEVADVTAARAAVDDGAAAVETALSA
ATEAERRHLDIENYSRRLERACAELVPLLDEHAELSALADVVAGMGSNAKKMSLRSYVLA
ARLEEVADAASERLRRMSGGRYEFVHSDAAESRGRRGGLGLDIHDEYTGAVRSTKTLSGG
ESFQASLALALGLADVVAAEGGGLVLDTMFIDEGFGSLDADALEAVMGVLDELRAGGRVV
GVVSHVDEMRQRIPSRLHVIRGRSGSTVRVAS

NT seq 2979 nt +upstreamnt +downstreamnt
atgagactgcaccacctcgagatcacggccttcggtccgttcgccgacaccgtcgagatc
gacttcgacgagctcggcgccgatgggttgttcctactgcacgggcagacgggcgcgggc
aagacgtcgatcctcgacgcggtcgcgttcgcgctctacggcaccgtccccggtgctcgc
tccgaggggcgccggttgctgtccgaccacgcacgggtgggtgctgtgccgacggtccgg
ctcgaggcgaccatcgcgggtcgccgtctggccatcgaacgcagccccgagttcgaacgc
ccgaagaagcgcggcaccggcacgatcaagcagcaggccaaggcgaatctcacctggctc
gacgggtcgggggagaacctgtcccgcgcccaggagatcggcgacgtcgtcaagtcgttg
ctcgggatgagcgccgaacagttcttccaggtggtgctccttccgcagggcgacttcgcc
cggttcctgcgtgcgaacagcgaggagcgcggcaggctgctcgagcgtctgttcgacacc
acccgtttcggcgacgtcgagcagtggttccgcgatcggcgcggtgccggaacgaaactg
cttgccgagcaacagaagaaggtcgaagtgctcgcggcgaaggtggccgcgtcggccggg
atcgaggcgggagccgacgccgatccggtggaatgggcgggccgcctgctcgccgaggcc
gccgagagtcgcgacgacgccgccgcagcgcttgcacgagtccgcgccgtcgacgaggtc
aaccggcgcaggctcgacgagaccgtcgctctcgccgaccgactccgccgccgccgcgac
gccctgaacatccttgccgaactcgagcagacgcagacgcagcgcgtcgccgtgacagcc
gaacgcgacgccgcgcatcgcgcggtgagcgtcgcggtcgtcgatcgggaggccgcccgc
ctcgcgcgcgaggccgatgccgctgtggcgcgcgccgagacggccgccgcgccgctccgc
aacgacgacgaaggacgcgaactcctccaggctgtcgggccgatgtcgtccgccgccgac
cgcgacatcatccgacctcgatgcgaggaatggtcctcggaggcagcgcgactcgacgtc
ctactcgatcgccgtcgtcgtctcaccgagctcgagaacgaacgcgagaagttcgccgga
cgtcgccgtgccctcaccgacgagcgtcggcaggtgatcgacgagcgcgccgcgctgccc
gaacgatcgaccgccgctgctgatgcggtcgccgaggccgaacgcgcagccgcgatgctc
ctcggcctgtccaccgcacgcgaccgtgccgccgacgcgctcgacgccgccaccgaactc
gcttcgcgccgaaacgaactcgaacggctcgaagcccgggtactgcaactgcactccgaa
cacaaccacgcacgcgacgcgcacctcgacgtccggcagcgccggatcgacggaatggca
gccgaactcgccgcgcgtctcaccgacggcgaaccgtgcatggtctgcggttccaccgaa
catcccgagcccgcgcgcccggctcccgacactgcgacgaaggcagacgaggaacgcgcc
cacgccgccgagcaacgcgccgccaccgcgctgagcgaagcacgcgaggccgtcaccgaa
ctctccgggatcgtcgccgtcctccgacagcgttgcggcgacgccgaactcgccgaactc
accaccgcccacgccgaggcggtccgcgcccacaacgaggccgccaccgtcgccggtcgg
ctcgaccatctgcgcgcgacggtcgaggacctgcgcaaactcgacacggtgctggccgaa
caggagaagcggctcgacgccgaactgtccgaactcgcccgcgaggacgcggtccgcgcg
gccgagatcacggagatccgcgagcgcatcgtcgaggccgtcggcgacctcgacctgctc
gccccgcgacggaggacggtcgcggcactgtccgccgccgccaccgcgctgctcgacgcc
cgcaccgccgccctgcaggcgcgcacggccgccgacgaacgcgccgccgacgcccgcacc
gcagccgcggaggcgggcttcaccgacctcgacagcgcccgcgcagctgtccggacaccc
gagcggctcgccgagatcgaccgcgtcctgcgcgccgccgacgacgaacgcgcggtggct
acctccacgctgaacgacccggcgatcgcggccctcaccggcgacgaggtcgctgacgtg
acggccgcgcgcgcagcggtggacgacggtgccgcggcggtcgagaccgccctgagcgcg
gccaccgaggccgagcgccggcacctcgacatcgagaactactcccggcgactcgagcgt
gcctgcgccgaactcgtcccgctgctcgacgaacacgccgaactctccgcgctcgccgac
gtcgtcgccggaatggggtcgaacgccaagaagatgtcgttgcgctcgtacgtgctcgcg
gcacgactcgaggaggtcgccgacgccgcctccgaacgcctgcgcaggatgtccggcggt
cgctacgagttcgtgcactccgacgcggccgaaagcagggggcgtcgcggcggtctcggt
ctcgacatccacgacgagtacaccggcgccgtgcgatcgacgaagacactgtcgggcggc
gagtccttccaggcgtccctcgcccttgccctcggcctcgccgacgtcgtcgccgccgag
ggcggcgggctcgtgctcgacacgatgttcatcgacgaagggttcggttcactcgacgcc
gacgccctcgaagcggttatgggggtgctcgacgaactgcgcgcgggaggccgcgtggtg
ggcgtggtcagtcacgtcgacgagatgcggcagcggatcccgagcaggctacacgtcatc
cgtggccgctcgggatccaccgtccgcgtcgcgagctga

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (7)   
   Pfam (7)   
All databases (12)   

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