KEGG T05830: CEJ39

Rhodococcus pyridinivorans TG9: CEJ39_08565

Entry

CEJ39_08565       CDS       T05830

Name

(GenBank) pseudouridine synthase

K06177

tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]

Organism

rby Rhodococcus pyridinivorans TG9

Brite

KEGG Orthology (KO) [BR:rby00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rby03009]
    CEJ39_08565
   03016 Transfer RNA biogenesis [BR:rby03016]
    CEJ39_08565
Enzymes [BR:rby01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     CEJ39_08565
    5.4.99.29  23S rRNA pseudouridine746 synthase
     CEJ39_08565
Ribosome biogenesis [BR:rby03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    CEJ39_08565
Transfer RNA biogenesis [BR:rby03016]
Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    CEJ39_08565

SSDB

Motif

Pfam:

PseudoU_synth_2

Other DBs

NCBI-ProteinID:

AWZ24229

Position

complement(1803261..1804235)

AA seq 324 aa
MVPVPMPSPLPVRNGVGPTRLRVPTSGPWSTVAEYVVARFDHLDADDLYRRFDAGEIVGI
DGEPIGRGTELGAHRFVWYYRDLPVEEPVPFHEEILHIDDDLVVVDKPHFLPTTPGGRYL
RESALVRLRTRLDNPDLTPIHRLDRATAGLVMFSARPETRGAYQSLFEKRRVTKVYEAVS
ALPAEWDPAAPQIAGRPVPVLYRNHIEARRGELRVVADDTREPNSETLIEVLGSGVSGSG
RAVLHTLLRPHTGRMHQLRVHLAALGIGILGDHWYPVLLPETPDDHSLPLQLLARELEFV
DPLSGVERRFATRRSLAEAPTTQD

NT seq 975 nt +upstreamnt +downstreamnt
atggtgcccgtgccgatgccctcaccgttgcccgtcaggaacggggtcgggcccacgcga
ctgcgtgttccgacctccggtccgtggtcgacggtcgccgagtacgtcgtcgcacgcttc
gaccatctcgacgccgacgatctctaccgccgcttcgacgccggcgagatcgtggggatc
gacggagaacccatcggtcgcggcaccgaactcggagcgcaccggttcgtctggtactac
cgcgatctgcccgtcgaggaaccggtgccgttccacgaggagatcctgcatatcgacgac
gacctcgtcgtggtcgacaaaccgcacttcctgcccaccactccgggcgggcgctacctg
cgcgaatcggcactggtccgtctgcggacccgcctcgacaaccccgatctgacaccgatc
caccggctcgaccgggcgaccgccgggctcgtgatgttctcggcccggcccgagacgcgc
ggcgcctaccagtcgttgttcgagaagcgccgggtcaccaaggtgtacgaggcggtgtcc
gcactgccggcggagtgggatccggcagcgccgcagatcgccggacgtccggtccccgtg
ctgtaccgcaatcacatcgaggcgcgacgcggtgagttgcgcgtcgtcgccgacgacacc
cgcgaacccaactccgagaccctgatcgaggtgctcggatccggggtgagcgggtcggga
cgggccgttctgcacaccctgctgcgcccgcacaccggtcggatgcatcagctgcgagtg
cacctggcggcgctcggtatcgggatcctcggcgaccactggtatcccgtgctgctgccc
gagacaccggacgaccattcgcttcctctccaattgctcgcgcgggaactcgaattcgtc
gaccccttgtcgggggtcgagcgtcgcttcgccacccggcgcagcctggccgaagcaccg
accacgcaggactga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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