KEGG   Rhodococcus pyridinivorans TG9: CEJ39_08935
Entry
CEJ39_08935       CDS       T05830                                 
Name
(GenBank) mismatch-specific DNA-glycosylase
  KO
K03649  double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
Organism
rby  Rhodococcus pyridinivorans TG9
Pathway
rby03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rby00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CEJ39_08935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rby03400]
    CEJ39_08935
Enzymes [BR:rby01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.28  double-stranded uracil-DNA glycosylase
     CEJ39_08935
DNA repair and recombination proteins [BR:rby03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CEJ39_08935
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AWZ24292
Position
complement(1880206..1880772)
AA seq 188 aa
MGFTRAELESFRDAVIPDLVAPGCRLLFVGINPGLWTAATGAHFARPGNRFYPALFRAGI
VDRPIDASSGMSDADRDHLLERGVGITNLAPRATARADELTDEELREGGRHLAHVVAEFR
PRAVAVAGITAYRAAFGRRKAKAGRQDDTIGDVPLWVVPNPSGLNAHETVESLARAYAEP
ARAAGILS
NT seq 567 nt   +upstreamnt  +downstreamnt
atgggtttcacgcgagccgaactcgagtccttccgcgatgcggtgatccccgatctcgtc
gcgcccggttgccgcctgttgttcgtcggcatcaatccgggattgtggaccgcggcgacg
ggagcccacttcgcgcggcccggaaatcgcttctaccccgccctgttccgtgccggcatc
gtcgaccggccgatcgacgcgtcgtccggtatgagcgacgccgaccgcgatcacctgctc
gagcggggtgtcggcatcacgaacctggcgccgcgtgcgacggcccgcgccgacgagctc
accgacgaggaactgcgtgagggcggacgccatctggcgcacgtggtggcggagttccgc
cctcgcgccgtggcggtcgcgggcatcaccgcctaccgcgcggccttcggccggcgcaag
gcgaaggccgggcggcaggacgacacgatcggtgacgtcccgttgtgggtggtgcccaat
ccgagcgggttgaacgcccacgagacggtggagtcactggcgcgggcctacgccgaaccg
gcccgggcggccggcatcctgtcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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