KEGG   Rhodococcus pyridinivorans TG9: CEJ39_16580
Entry
CEJ39_16580       CDS       T05830                                 
Name
(GenBank) hypothetical protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
rby  Rhodococcus pyridinivorans TG9
Pathway
rby03030  DNA replication
rby03430  Mismatch repair
rby03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rby00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CEJ39_16580
   03430 Mismatch repair
    CEJ39_16580
   03440 Homologous recombination
    CEJ39_16580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rby03032]
    CEJ39_16580
   03400 DNA repair and recombination proteins [BR:rby03400]
    CEJ39_16580
Enzymes [BR:rby01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CEJ39_16580
DNA replication proteins [BR:rby03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CEJ39_16580
DNA repair and recombination proteins [BR:rby03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CEJ39_16580
SSDB
Motif
Pfam: RNase_T Rv2179c-like GIY-YIG DEDDh_C UVR
Other DBs
NCBI-ProteinID: AWZ25570
Position
3533413..3535161
AA seq 582 aa
MTSPQPSALGVQLGFDELDTPLRETTFVVVDLETTGGKAAEDAITEIGAVKIRGGEVLGE
FATLVDPGRPIPPYIVQLTGITTAMVYAAPKVEEVLPAFLEFASGAVLVAHNAGFDVGFL
EAATAQCELAWPRFQVLCTVKLARRVLGRDEAPSVKLSALAELFRVSTVPTHRALDDARA
TVDVLHALIERVGNQGVHSLTELRDYMPVVTAEQRAKRALAAHLPRKPGVYMFRGPSDEV
LYVGTAVDLHRRVRTYFTGSETRPRLREMVALTTRIDHVQCAHGLEAGVRELRLIAAHTP
PYNRRSKYPMRGWWIILTDEAFPRLAVSRTPGPDSVGPFSVRADAADVAALLAEMCGLRT
CTRRIGRTARHGDRCPPVAVGGCAAAAFGVQDASAYAAQVERARAVVRGTADDAVESAQQ
RLDALVRDQLFENAARLRDRLAAALVALRRTQRLAALAAVDELVAARPRAEGGWEFAVVR
AGRLASAGVAPRGVRPMPVVEAIVAAAETVRPSPGPLRGASPEEIGLVARWLDGEGIRIV
RASEGWCEPTRGAGRWSTWAELARDARAVRRLLSADDPHRLG
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgacctcgccgcaaccatccgccctcggcgtgcaactcggtttcgacgagctcgacact
ccgctgcgcgagaccaccttcgtcgtcgtcgacctcgagacgaccggcgggaaggcagcc
gaggacgccatcacagagatcggcgcggtgaagatccgcgggggcgaggtgctcggcgag
ttcgcgaccctcgtcgatccggggcgacccatccccccgtacatcgtgcagctcaccggc
atcaccaccgcgatggtctatgcggcgcccaaggtcgaggaggtgctgcccgccttcctg
gaattcgcgtccggagcggtgctcgtcgcacacaacgccggattcgacgtcggcttcctc
gaggcggccacggcgcagtgcgaactcgcgtggccccgcttccaggtgctgtgcaccgtc
aagctggcccgccgcgtcctcggacgcgacgaagcgccgtcggtgaagctgtccgcgctg
gccgaactgttccgggtctccaccgtgcccacccaccgcgccctggacgacgcacgcgcc
accgtggacgtcctgcacgccctcatcgaacgggtcggcaaccagggcgtccacagcctc
accgaactgcgcgactatatgccggtggtcaccgccgagcagagggccaaacgcgcactc
gccgcgcatctgccgcgcaaaccgggtgtctacatgttccgcggcccgtcggacgaggtg
ctgtacgtcggcacggcggtcgacctgcaccggcgtgtccgtacctatttcacgggctcc
gagacgcgaccgcggttgcgcgagatggtcgcgctcaccacacgcatcgatcacgtccaa
tgcgcccacgggctcgaggccggcgtccgcgaactccggttgatcgcggcccacacccct
ccctacaaccgccggtcgaaatatccgatgcgcggttggtggatcatcctcaccgacgag
gcgttcccgcgcctcgccgtgagccgcacccccggacccgactcggtcggcccgttctcg
gtgcgcgccgacgccgcggatgtcgcggcactgctcgcggagatgtgcggtctgcgcacc
tgcacgcgcaggatcggccgtacggcccgccacggcgaccgctgcccgcccgtcgcggtc
gggggctgcgccgcagccgccttcggggtccaggacgcctccgcctacgcagcccaggtc
gagcgtgcgcgcgcggtcgtccgcggaaccgccgacgacgccgtcgaatcggcgcagcag
cgactcgacgccctcgtgcgcgaccagctgttcgagaacgccgcccgcctccgcgaccgc
ctcgccgccgccctcgtcgcgctgcggcgcacgcaacgcctcgcggcgctggcggccgtc
gacgaactcgtcgccgcgcgtccgcgggccgagggcgggtgggagttcgccgtcgtgcgc
gccggtcgtctcgcgtccgccggagtggcaccgcgcggtgtgcgcccgatgcccgtcgtc
gaggcgatcgtcgccgcggccgagacggtgcggccgtcacccggcccgctccggggcgcg
tccccggaggagatcggtctggtcgcacgttggctcgacggcgagggcatccgcatcgtc
cgggcgagcgagggctggtgcgaaccgacacggggtgcgggccggtggagcacgtgggcc
gagctcgcccgcgacgcccgcgcggtccgcaggctcctctccgccgacgacccgcaccgc
ttaggctga

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