KEGG T02600: RUM

Ruminococcus champanellensis: RUM_08950

Entry

RUM_08950 CDS T02600

Definition

(GenBank) ribosomal large subunit pseudouridine synthase D

K06180

23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]

Organism

rch Ruminococcus champanellensis

Brite

KEGG Orthology (KO) [BR:rch00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rch03009]
    RUM_08950
Enzymes [BR:rch01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     RUM_08950
Ribosome biogenesis [BR:rch03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    RUM_08950

SSDB

Motif

Pfam:

PseudoU_synth_2 S4

Other DBs

NCBI-ProteinID:

CBL17071

UniProt:

D4LBS6

Position

982633..983547

AA seq 304 aa
MREVMLTADGSGMRLDKWLTEQLPELSRSGVQHLIEQGAVLCNGKPAAKNLKLREGDGLL
VQIPDPAPLEDVQPQNLPLEIVYEDEALLVVNKPKGMVVHPAAGHPDGTLVNALLYHCQG
RLSTINGVIRPGIVHRIDKNTSGLLMVAKTDFAHQHLAEQIKGHSFTREYEAIACGRFRE
PSGTVDAPIGRSTADRQKMCVTEKNARHAVTHYAVLTQFAKHAHIRCRLETGRTHQIRVH
MRYIGHPIYGDDVYGTAVPGLEGQCLHAKKIGFVHPVSGAYMEFDSALPDYFVQALKKVE
HIHV

NT seq 915 nt +upstreamnt +downstreamnt
atgcgtgaggtcatgctgacggctgacggcagcggcatgcggttggacaaatggcttaca
gagcagttgccggagttgagtcgttccggggtgcagcatctgatcgagcagggcgcagtg
ctttgcaacgggaaaccggcggcaaagaatctgaagctccgggaaggggacggcctgttg
gtgcagatcccggatcctgccccactggaggatgtacagccccagaacctgccgctggag
atcgtatacgaggatgaagccctgctggtggtgaacaagcccaagggcatggtggtgcat
ccggcggcagggcatccggacggcacattggtgaatgccctgctgtatcactgccagggt
agactgtccaccatcaacggggtgatccgtcccggtatcgtgcaccggatcgacaaaaac
accagcggtctgctgatggtggcgaaaacggattttgcccatcagcatctggcggagcag
atcaaaggccacagctttacccgggaatatgaagccattgcctgcggacggttccgggag
ccttctggcacggtggatgctcccatcggcagaagcacagcggatcggcagaaaatgtgc
gtgacggagaaaaatgcccggcatgcggtgacccattatgcagtgctgacccagtttgca
aagcatgctcatatccggtgtcggctggaaaccgggcgcacccatcagatccgggtacat
atgcgctacatcgggcatcccatttacggagacgatgtgtacggcacggctgtccccggt
ctggagggacagtgcctgcatgccaaaaagatcgggtttgtgcatccggtttccggcgca
tacatggagtttgacagtgcgctgccggattactttgtccaggcactgaaaaaggtggag
catatacatgtttaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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