KEGG   Ruminococcus champanellensis: RUM_11460
Entry
RUM_11460         CDS       T02600                                 
Name
(GenBank) Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
rch  Ruminococcus champanellensis
Pathway
rch00061  Fatty acid biosynthesis
rch00071  Fatty acid degradation
rch01100  Metabolic pathways
rch01212  Fatty acid metabolism
rch02024  Quorum sensing
Module
rch_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rch00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    RUM_11460
   00071 Fatty acid degradation
    RUM_11460
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RUM_11460
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rch01004]
    RUM_11460
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rch04147]
    RUM_11460
Enzymes [BR:rch01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     RUM_11460
Lipid biosynthesis proteins [BR:rch01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   RUM_11460
Exosome [BR:rch04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   RUM_11460
  Exosomal proteins of breast cancer cells
   RUM_11460
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: CBL17294
UniProt: D4LCE9
Position
complement(1255387..1257009)
AA seq 540 aa
MTRHLEYPDCSLYGQIAKTAKAYPDGCALSYYGRRITYRKLMEMIDRCGEALSSLHIQKG
DSVAVILPNMPQTVIVFYALNKLGAVANMIHPLSARGEIEYYLQLSGSKVILALDGIAEK
LEGLSADTVIIVSPDSFMPLPLRIAYRIRIKREPHDRMDWHTLMQQPGAPVTDMGKGADG
AAALYTGGTTGKPKGILLTNLNFNALALQSMDACGCLLPGDRVLSVMPMFHGFGLGVCIH
TVLTFGGTAILLPRFHPKEFHRLIARYRPNVIAGVPSIYEYLLRSDLGKLKLDFLKVAIS
GGDSLAVSTKRQLDRILRQHGSSARIREGYGLTECVTGSCLMPQESEKEGSIGLPYADTE
YRIYDNQHQTALPPGELGEIILRGPTVMQGYLQNPEETARALQTHADGHTWLHTGDLGCM
DADGYIYFKQRCKRVIVSNGYSIYPQAIENAILSCPEVSACAVVGVQDPIRGQLVQAFVV
LKEHAATEQTEQALREICREQVAAYALPRKYVFLEALPKTLVGKIAYSQLEAMGSEEEDT
NT seq 1623 nt   +upstreamnt  +downstreamnt
atgacaagacatcttgaatatccggactgctccctgtatgggcaaattgccaaaaccgcc
aaagcatacccggacggctgtgcactttcctattacggcagacggatcacctaccgaaag
ctgatggagatgatcgatcggtgcggagaggcattaagcagcctgcatatccaaaaggga
gacagcgtggcggtgatcctgccaaatatgccccagacggtaattgtcttttatgccctc
aataagctgggggcggtggcaaatatgatccaccccctttccgcccggggcgaaatagaa
tactatttgcagctcagcggcagcaaagtgattctggcactggacggcattgcagaaaag
ctggagggtctgtcggcggatactgttataatagtatccccggacagctttatgcccctg
ccccttcgcattgcataccggatccgcataaaaagggaaccgcatgaccggatggattgg
cacacactcatgcaacagcccggcgctcccgtcaccgatatgggcaaaggcgccgacggt
gcagcagcgctttacaccggaggcaccaccggcaagccaaagggtatcctgctgaccaac
ttgaatttcaatgccctggcactgcaaagcatggatgcctgcggctgtctgttgcccggt
gatcgggtactttccgtgatgcctatgtttcacggctttggtctgggcgtatgcatccac
acggtgttgaccttcggcggcaccgccattttgctgccccggttccatcccaaggaattt
cacaggctgatcgccagataccgccccaacgtaatcgccggggtgccgtccatttatgag
tatctgctgcggagtgacctcggcaagctgaagctggattttctcaaggtcgccatctcc
ggcggagattctcttgcagtcagcaccaagcggcagttggatcggatactccggcagcat
ggcagctccgcccggatccgggaagggtacggtttgaccgaatgcgtcaccggctcctgt
ctgatgccccaggaaagcgaaaaagagggcagcataggtctgccctatgcggatacagaa
tatcggatctatgacaaccagcatcagacagccctgccccctggcgaactgggcgagatc
attctccgggggccgacggtgatgcagggatatctgcaaaatccggaggaaactgcccgg
gcgctgcaaacccatgcagacgggcacacatggctccataccggagatctggggtgcatg
gatgcagacggatatatctacttcaagcagcgttgcaagcgagtgatcgtttccaacggc
tacagcatttacccccaggccattgaaaacgccattctttcctgtccggaggtatctgca
tgcgctgtggtaggggtgcaagatcccatccggggacagcttgtacaggcgtttgtggtt
ttgaaggagcatgccgcaacggagcagaccgagcaggcactccgggagatctgccgggaa
caggtggctgcctatgctctgccacgaaagtatgtgttcctggaggctctgccgaaaacc
ctggtgggtaagatcgcctacagccagctggaggcaatgggcagtgaggaggaggataca
tga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system