KEGG   Rickettsia canadensis McKiel: A1E_00525
Entry
A1E_00525         CDS       T00603                                 
Name
(GenBank) hypothetical protein
  KO
K03201  type IV secretion system protein VirB6
Organism
rcm  Rickettsia canadensis McKiel
Pathway
rcm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rcm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    A1E_00525
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rcm02044]
    A1E_00525
Secretion system [BR:rcm02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   A1E_00525
SSDB
Motif
Pfam: TrbL SCP2_2
Other DBs
NCBI-ProteinID: ABV73055
UniProt: A8EXH2
Position
125852..129292
AA seq 1146 aa
MNKNIFITLLISLLLLSSCTGDTCIDPDDFGFIKFNISSRYDLEEITSRQEGDQVAPWRN
SAYKVNGYPLTVMVRPWSYILGDKNTSGQLSAWCPWYGQKNDTTTLAALCVKLQPCLFID
NDMCRPSPINQNDAAIYNAPCIMTNGVGLYFLIAAKNTDPNISPDSQRKPQGITQHLGEP
PPNNDYAFYSISSTGQFLKAGGINYQYKGEDKSKYAQCPLYFKIIDKFYNDNSGQYRLVI
KSGISDTRPDPLQFLTNLIKKVLFGTSDQDHGIVRKVYTQIIDTSGYRMSVSAILTLYIM
FTGFSFLIGNINLTHVELIIRILKVSIVSILLSTDKAWTFFHDYLFVFFIDGVQQILQII
NEASANGPGSQTLLGLLIAPQTLSKLFSLLFVDWLGFIYIILYFIALYFIFLLIFKATII
YLTALIIIGMIITMGPIFICFMLFNITRSLFENWLRQLISYAIQPLILFAGIAFISMIIR
TEIYSTLGFAVCKHDFPNLGPINEIFGSFLEDIDPSLGNSIFYWWFPVPMKGGINNFHKA
KILVPEDHIRDDGKHCAAYECIDERYIELPFLDLVKDAKRISNFINGKFVQLDGILLIFV
SIYLLSKFNDIAISTAAFIAGTSGNLTDIQKVNQQSASLATKQMNRPLNYVAKTLSAPVT
TRVSAKLEETSMFFAAKFENMMMRRLENQALGSAANKAVQNEVKRKYGIDSKDVKMNAIT
DYENSISGLLENLPKGNELKAKELSQMKFTQLRDKIAENKYGVKDYDSLSKEQKTELDKL
LKDANLRELASDANFTRDYQKAYKDAHQDMSGRGIGLFGKNIGVLRSWQEMQHRVKSKRA
LKEQKRVGIGEKIYAGYTGITRAALTAIVGKDLRDAYEGNLTSAEWHDFEYNDPRLRTYS
EKLKDEEKVREFQELQMHINKETLAAQADVLSPEYLARLEQTGRQSDVEYYQELAQRKLI
HEVRSRLSEEDDPVMMGDRFMREKATDSQMRDMIDNAHRKYVQFIDEDRYIRRQEYYDIM
HEKAQENLEQTYKELKDHFKRDDIKLEEMPVLIAQKFKDTDGGAEIDKKITEEINNFNAN
VNNYEYSTEVLNKIEDRKQVITDEVNAQINQINKYRENAKMQTYVKPIVNKGRKLRKLED
HLRNMK
NT seq 3441 nt   +upstreamnt  +downstreamnt
atgaacaaaaatatttttattacattattaatatcgctattgttgctttccagttgtacc
ggtgatacttgcattgaccctgatgatttcggttttatcaaatttaatatctcttctaga
tatgatttggaagagattacttcaagacaggaaggagatcaggtagcaccatggcgtaat
agtgcttataaagtaaacggttatcctttaaccgttatggtaagaccgtggagttatata
cttggcgataaaaatacttcaggtcagttatctgcatggtgtccatggtatggtcaaaaa
aatgatacaactactttggctgctttgtgcgttaagctacaaccgtgtctttttatagat
aatgatatgtgtagacctagtcctataaatcaaaatgatgctgctatttataatgctcca
tgtatcatgacaaacggtgtaggactttattttcttattgccgctaaaaataccgatcct
aatatttcgcccgattcacagcgtaaaccgcaaggtataactcagcatttaggagaaccg
cctccaaataacgattatgcattttatagtattagtagtacaggacaatttttaaaagcc
ggcggtataaattatcaatataaaggtgaggataagtcaaaatatgctcaatgtcctctt
tattttaagattatagataaattttataatgataatagtgggcaatatagattagtgata
aagtctggaattagtgatactagacctgacccattacaatttttaacgaatttgataaaa
aaagtattatttggtactagtgatcaagatcacggcattgtaagaaaagtttatacacaa
ataattgatacttctggttatagaatgagtgtctcggctattttaactctatatataatg
tttacgggcttttcctttttaataggtaatataaaccttactcatgttgaacttataatt
agaatattaaaagttagtatagtctcaatattattaagtacggataaagcttggacattt
tttcatgattatttatttgtattttttattgatggagttcagcaaatactgcaaataatt
aatgaggcttctgctaacgggccaggttctcaaaccttgcttgggttacttattgctcct
caaactttatctaaattattttctttactgtttgttgattggcttggctttatatacatc
attctatattttatagctctgtattttattttcttgcttatatttaaagctactattatc
tatctaactgctcttataattatcggtatgattataactatgggaccgatatttatttgc
ttcatgttgtttaatatcactcgttcgttatttgagaattggttaaggcaattaatatca
tatgcaatacaacctctaatcttattcgctggtattgcttttatttcaatgatcatcaga
accgaaatatattcaacgcttggttttgcagtatgtaaacatgattttcctaatttaggt
ccgataaatgaaatatttggtagtttccttgaggatatagatccaagtcttggtaattca
atattttattggtggttccccgtaccaatgaaagggggtataaataatttccacaaagca
aagatattagttcctgaagatcatataagagatgacggtaagcattgcgctgcgtatgag
tgtatagatgaacgctatattgagttaccgtttttagatttagttaaagatgcaaaaaga
attagtaattttataaatgggaaatttgtccaacttgacgggatattattgatttttgtg
tctatttatttactaagtaaatttaatgatattgctatatcgacagcagcatttattgcc
ggtacttcgggtaatttaacagacatacaaaaagttaatcagcaatctgcatcacttgca
acgaagcaaatgaatagaccactaaattatgtggctaagacattaagtgcacctgtaact
acccgtgtaagtgcaaagttggaggaaacaagtatgttttttgccgcgaaatttgaaaat
atgatgatgagaagacttgaaaatcaagcccttggttctgctgctaacaaagccgtacaa
aatgaagttaagaggaaatacggtatagattctaaagatgtaaaaatgaatgctattacg
gattatgaaaacagtatttcaggattattagagaatttacctaaagggaatgaattaaaa
gcgaaagaactatcacaaatgaaatttactcagcttcgagataaaattgctgaaaataaa
tatggagtgaaagattacgactctttaagtaaagaacaaaaaactgagcttgataagtta
ttaaaagatgctaacttacgtgaactagctagtgatgcaaactttactagagattatcaa
aaagcttataaagatgctcatcaagatatgtcagggcgaggaataggtttatttggtaag
aatataggagtattaagaagttggcaagagatgcagcatcgggttaaatctaagagggct
ttaaaagaacaaaaacgtgtaggtataggtgaaaaaatatatgctggttatacaggaata
acaagagctgctttaactgcaatagttggtaaagatttacgtgatgcttatgagggtaat
ctaactagtgctgaatggcatgattttgaatataacgatccaagactgagaacttatagt
gaaaaattaaaagatgaagaaaaagtacgagaatttcaagagcttcaaatgcatattaat
aaggaaacgctagctgctcaagcagatgtgttatcaccggaatatctagcaagactagag
caaacaggtagacagagtgatgtggaatattatcaagaattagctcaaagaaagctaatt
catgaggtacgtagtaggttatccgaggaagatgatccggtcatgatgggtgacagattt
atgcgtgagaaagctactgattctcagatgcgggatatgatagataacgctcatagaaaa
tatgtacaatttatagatgaagatcgatatattcgtcgtcaagagtattatgatattatg
cacgagaaagcccaggaaaatttagaacaaacttataaagagcttaaagatcatttcaaa
agagatgatatcaagctcgaagaaatgccggtattaatagcacaaaagttcaaagatact
gacgggggagctgaaatagacaaaaagattacagaagagattaataactttaatgctaat
gttaacaattacgaatatagtactgaagtactaaataaaatagaggatagaaagcaagtt
attaccgatgaagtaaatgctcagatcaatcagattaataaatatagggaaaatgcaaaa
atgcaaacctatgtaaaacctatagtaaataaaggcagaaaactaagaaaattagaagat
catttgagaaatatgaagtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (5)   

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