KEGG   Rosa chinensis (China rose): 112166185
Entry
112166185         CDS       T06020                                 
Name
(RefSeq) DNA-directed RNA polymerases II and V subunit 8A
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn03020  RNA polymerase
rcn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112166185
  09124 Replication and repair
   03420 Nucleotide excision repair
    112166185
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rcn03021]
    112166185
   03400 DNA repair and recombination proteins [BR:rcn03400]
    112166185
Transcription machinery [BR:rcn03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     112166185
  RNA polymerase III system
   RNA polymerase III
     112166185
  RNA polymerase I system
   RNA polymerase I
     112166185
DNA repair and recombination proteins [BR:rcn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      112166185
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 112166185
NCBI-ProteinID: XP_024158726
Position
5:53653502..53659725
AA seq 144 aa
MVDRLFEDIFQILQLNPDGKKFDKVTRIEAKSETCEMFMHLDVNTEVYPMKEGEKFSMAL
TSTLNLDGTPDTGYFTPGNRKTLADEYEYVMQGKLFKISEGSKRDPKAEVNASFAGLLMM
LKGESSQFKNFELDQRLFLLIRKL
NT seq 435 nt   +upstreamnt  +downstreamnt
atggttgatcgtctttttgaggatatctttcaaatactacagttaaacccagatgggaaa
aagtttgataaggttactcgaattgaagcaaaaagtgagacatgcgagatgttcatgcac
ctagatgtgaatacagaggtgtatcccatgaaggaaggtgagaagttctcaatggctcta
acttctacactcaacttggatggaacacctgacactggctatttcactccgggaaatcgc
aagacgttggctgatgaatatgagtacgtcatgcaagggaagctttttaaaatctcagaa
ggttctaaacgggatcctaaagcggaggtgaatgcttcatttgctgggctgttgatgatg
ctcaagggggaatcctctcaattcaagaactttgaactggatcaaaggctgtttctcctc
atcaggaagctatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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