KEGG   Rosa chinensis (China rose): 112168403
Entry
112168403         CDS       T06020                                 
Name
(RefSeq) THUMP domain-containing protein 1 homolog
  KO
K06963  tRNA acetyltransferase TAN1
Organism
rcn  Rosa chinensis (China rose)
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rcn03016]
    112168403
Transfer RNA biogenesis [BR:rcn03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    112168403
SSDB
Motif
Pfam: THUMP
Other DBs
NCBI-GeneID: 112168403
NCBI-ProteinID: XP_024161288
Position
5:complement(52203508..52208924)
AA seq 391 aa
MATENNKSKWSSAPKSKKGKTRYLPHNRSVKKKGSYPLHPGVEGFFITCDGGRERQASHE
ALNVIDSFFEELVQGKDSGINLSEAPSKPLNKKIKFTYSDSSSSDDDNDDDNKEEGETEE
PVEDKEVVKGENKSDTCRDDDGSHDNQISETSDLEKKDNALSENKPEEDTKDDKEGSISK
EISAKEGEEPPAKKQCLGTDSSKRIPDKVEEKSIDKLIEDELQELKDKNKRRFVNLESGC
NGVVFVQMRKRDGDPGPKDIVQHMMTSAAATRKHMSRFILRVLPVEVSCYASEEEISRAI
KPLLAQYFPLETQSPRKFAVLYGARANTGIDRMKIIDAVAKSVPEPHKVDLSNPDLNIVV
EICKTICLIGVVENYKQLAKYNLRQLTSPKP
NT seq 1176 nt   +upstreamnt  +downstreamnt
atggcgactgagaataataaatccaagtggtcctcagcccccaagtccaagaagggaaag
actcgttaccttcctcacaacaggtcggtgaagaagaaagggtcgtatcctttacacccg
ggcgtggaaggattctttatcacttgtgatggcggcagggaacgccaggcctctcatgaa
gctctcaacgttattgactcgttttttgaagagcttgtacaggggaaggattcagggata
aatctttctgaggcacccagtaaacctttaaataaaaaaatcaagttcacatactctgat
tcttctagtagtgatgatgataatgatgatgataacaaagaggagggagaaactgaggaa
cctgttgaagacaaggaggtggtcaagggagaaaataaatctgatacttgtagagatgat
gatggtagtcatgataatcaaataagcgagacatcagatctcgagaagaaagacaatgct
ctctctgaaaataaaccagaggaagatactaaagacgacaaagagggtagtataagtaaa
gagatttctgcaaaagaaggtgaagagccaccagcaaagaaacaatgtctaggaacagat
tcatcaaaaaggatcccggataaagtagaagagaaatccattgataaactaattgaagat
gagctccaagaacttaaagataagaacaagaggcgctttgtcaaccttgagtcaggttgt
aatggtgtcgtcttcgttcaaatgcggaagagagatggagatcctggccccaaagatatt
gtacagcatatgatgacatctgctgctgcaacgaggaaacacatgtcgaggtttatctta
agggtattacctgtcgaagtatcgtgctatgcttcggaagaggagatttccagagcaatt
aaacctcttcttgcacaatattttcccttggaaactcagagtcctcggaagtttgcagta
ctttacggagcacgggcaaatactggtattgataggatgaaaatcatagatgcagtggca
aaatctgtgcctgaacctcacaaagttgaccttagcaaccctgatttgaacattgtagtt
gaaatttgcaagactatttgcttgattggtgttgttgaaaattataagcagttggccaag
tacaacctgaggcagctcacatcacctaagccatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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