KEGG   Rosa chinensis (China rose): 112170004
Entry
112170004         CDS       T06020                                 
Name
(RefSeq) tubulin alpha chain
  KO
K07374  tubulin alpha
Organism
rcn  Rosa chinensis (China rose)
Pathway
rcn04145  Phagosome
rcn04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:rcn00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    112170004
  09142 Cell motility
   04814 Motor proteins
    112170004
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcn03019]
    112170004
   03036 Chromosome and associated proteins [BR:rcn03036]
    112170004
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rcn04812]
    112170004
   04147 Exosome [BR:rcn04147]
    112170004
Messenger RNA biogenesis [BR:rcn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112170004
Chromosome and associated proteins [BR:rcn03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     112170004
Cytoskeleton proteins [BR:rcn04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    112170004
Exosome [BR:rcn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112170004
  Exosomal proteins of other body fluids (saliva and urine)
   112170004
  Exosomal proteins of colorectal cancer cells
   112170004
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 112170004
NCBI-ProteinID: XP_024162918
Position
6:complement(4048024..4050762)
AA seq 450 aa
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA
SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAESAEGDDDEGDEY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgagagagtgcatttcgatccacatcggtcaggccggtattcaggtcggcaatgcctgc
tgggagctttattgccttgagcatggtatccagcctgatggccaaatgccaagtgacaag
actgtaggcggaggagacgatgccttcaacacctttttcagtgaaactggtgccgggaag
catgtccctcgcgcaatctttgttgacctcgagcccacagttattgatgaagtgaggact
ggaacctaccgccagctcttccaccctgagcagctcatcagcggcaaggaagatgctgcc
aacaactttgccagaggtcactataccattggcaaggagattgttgatctctgcttggac
cgcatcaggaaactcgctgacaactgcactggtctgcaagggttcctggttttcaatgct
gttggtggaggcactggctccgggcttggatcccttctgttggagcgtttgtctgttgac
tatggaaagaagtcaaagcttgggttcactgtgtacccctctccacaggtttctacctct
gtggttgagccctacaacagtgtactctcaacccactccctcctggagcacacagatgtt
gctgttctccttgacaatgaggcaatctatgatatctgcaggcgctctcttgacattgag
cgacccacctacacaaacctcaaccgacttgtatctcaggtcatttcctctttgactgcc
tccttgaggtttgacggtgctctcaatgtggatgttactgagttccagaccaacttggtt
ccctaccccagaatccactttatgctttcttcctatgcacctgtcatctctgctgagaag
gcttaccatgaacagctctcagtggctgagatcaccaacagtgcttttgaaccctcatct
atgatggccaagtgcgatcctcgccatgggaaatacatggcttgctgtttgatgtaccgt
ggtgatgttgtacccaaggacgtgaatgctgctgttgccaccatcaagaccaagcgcaca
attcaatttgttgactggtgccctaccggattcaagtgcggtatcaactaccagccaccc
actgttgtccccggaggtgaccttgccaaggtgcagagggctgtctgcatgatctccaac
tcaaccagtgttgctgaggtcttctcaagaattgaccacaagtttgatctcatgtatgcc
aagcgtgctttcgtgcactggtatgtgggtgagggtatggaggaaggtgagttctctgag
gcccgtgaggatcttgctgccctcgagaaggattatgaagaggttggtgctgagtctgct
gagggcgatgatgatgaaggggatgagtactaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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